RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 GLG1Q92896 1179 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 IQSEC2Q5JU85 1478 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 KIF3CO14782 793 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 TMEM191BP0C7N4 346 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 CIAPIN1Q6FI81 312 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 EAF2Q96CJ1 260 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ARID3AQ99856 593 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 TUFT1Q9NNX1 390 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ANO9A1A5B4 782 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 LUC7L3O95232 432 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 CALB1P05937 261 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ZBED6P86452 979 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 CABLES1Q8TDN4 633 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 RPS6KC1Q96S38 1066 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 ISCA1Q9BUE6 129 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 CARD6Q9BX69 1037 aa4.7□□□□□ -1.66
VPS13C-202ENST00000261517 QTRT2Q9H974 415 aaKnown RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 TOPORSQ9NS56 1045 aaPredicted RBP4.7□□□□□ -1.66
VPS13C-202ENST00000261517 GRID2IPA4D2P6 1211 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 ZFXP17010 805 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 FAM227BQ96M60 508 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SKIP12755 728 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 GCOM2Q9BZD3 368 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SYNGAP1Q96PV0 1343 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SLIT3O75094 1523 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SERPING1P05155 500 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 BRINP3Q76B58 766 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 F8W031 263 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 GOLGA8TH3BQL2 631 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 ZBTB5O15062 677 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SLC16A3O15427 465 aaKnown RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 GOLGA8HP0CJ92 632 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 CAPN2P17655 700 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 FKBP1AP62942 108 aaKnown RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 GTF2IP78347 998 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 MYL7Q01449 175 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 NKX1-1Q15270 411 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 C17orf75Q9HAS0 396 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 NOP14P78316 857 aaKnown RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 MXRA7P84157 204 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 P2RX5Q93086 422 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 FAM193BQ96PV7 902 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 FGFR1OP2Q9NVK5 253 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 K7ENM7 598 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 ENTPD3O75355 529 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 LIG1P18858 919 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 TNNI1P19237 187 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 KRT81Q14533 505 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 GRM4Q14833 912 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 MOXD1Q6UVY6 613 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 ZHX2Q9Y6X8 837 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 PHLDB3Q6NSJ2 640 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 PIM2Q9P1W9 311 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 ATP5HO75947 161 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SLC8A1P32418 973 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SF3B3Q15393 1217 aaKnown RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 UNC13DQ70J99 1090 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 RAB44Q7Z6P3 723 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 FRMD8Q9BZ67 464 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 MAGEB5Q9BZ81 275 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 ASB14A6NK59 587 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 RIMBP2O15034 1052 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 CCNE1P24864 410 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 ETF1P62495 437 aaKnown RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 XKR9Q5GH70 373 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 RNF34Q969K3 372 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 LRRC2Q9BYS8 371 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SUDS3Q9H7L9 328 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 DBNLQ9UJU6 430 aaKnown RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 A6NJR5 290 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 CYP2E1P05181 493 aaPredicted RBP4.69□□□□□ -1.66
VPS13C-202ENST00000261517 EPHB4P54760 987 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 HHIPL2Q6UWX4 724 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF354CQ86Y25 554 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 MAPKAPK5Q8IW41 473 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 CCDC63Q8NA47 563 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 SH3TC2Q8TF17 1288 aa4.69□□□□□ -1.66
VPS13C-202ENST00000261517 PHKA2P46019 1235 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 MAPK6Q16659 721 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 NAALADL2Q58DX5 795 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 GCNAQ96QF7 691 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 ZNF577Q9BSK1 485 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 UBR1Q8IWV7 1749 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 A0A0D9SFI3 127 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 WDR64B1ANS9 1081 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 CFBP00751 764 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 SLFNL1Q499Z3 407 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 TMTC3Q6ZXV5 915 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 CCDC105Q8IYK2 499 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 FRMD8P1Q9BZ68 369 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 NACA2Q9H009 215 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 DRC3Q9H069 523 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 SAP30BPQ9UHR5 308 aaKnown RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 GJA3Q9Y6H8 435 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 EPN1Q9Y6I3 576 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-202ENST00000261517 P4HA2O15460 535 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 SASH1O94885 1247 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 USP17L8P0C7I0 530 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 PTGDRQ13258 359 aa4.68□□□□□ -1.66
VPS13C-202ENST00000261517 RESP18Q5W5W9 173 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms