RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 ANKRD40Q6AI12 368 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 TRPM8Q7Z2W7 1104 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 IFNL3Q8IZI9 196 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 TTC5Q8N0Z6 440 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 USP38Q8NB14 1042 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 DHTKD1Q96HY7 919 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 INPP4AQ96PE3 977 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 STRBPQ96SI9 672 aaKnown RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 SH3BP1Q9Y3L3 701 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 LRRC53A6NM62 1247 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ASAP2O43150 1006 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 KIF4AO95239 1232 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 MYBP10242 640 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 NQO1P15559 274 aaKnown RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ALX1Q15699 326 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 PKN1Q16512 942 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 TDRD12Q587J7 1177 aaKnown RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ZSCAN29Q8IWY8 852 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 GIMAP8Q8ND71 665 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 P2RX5Q93086 422 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ELAC2Q9BQ52 826 aaKnown RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 PIH1D3Q9NQM4 214 aaKnown RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 V9GY48 417 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 UBR2Q8IWV8 1755 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 A0A0G2JS52 829 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 RHOBTB3O94955 611 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 MMEP08473 750 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ALADP13716 330 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 PDE6AP16499 860 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 CCNE1P24864 410 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ALDH5A1P51649 535 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 KCNJ2P63252 427 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 CCDC178Q5BJE1 867 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 CACNA2D4Q7Z3S7 1137 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 PRCCQ92733 491 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 TAF4BQ92750 862 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 CNKSR1Q969H4 720 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 CENPTQ96BT3 561 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ZNF317Q96PQ6 595 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 CCDC85AQ96PX6 553 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 TSC22D3Q99576 134 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 EPB41L4AQ9HCS5 686 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-201ENST00000261443 DISC1Q9NRI5 854 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ZFATQ9P243 1243 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 CHD4Q14839 1912 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 MYH2Q9UKX2 1941 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 LRP6O75581 1613 aa7.93□□□□□ -1.14
CSDE1-201ENST00000261443 ATRNO75882 1429 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 GOLGA6L10A0A0M3HER8 536 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 A6NHS1 94 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 EIF4E1BA6NMX2 242 aaKnown RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 KLRC4O43908 158 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 CAND2O75155 1236 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 LONP1P36776 959 aaKnown RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 FLT3P36888 993 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PAPOLAP51003 745 aaKnown RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PDCD2Q16342 344 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 GNPTABQ3T906 1256 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 MEI1Q5TIA1 1274 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PIK3AP1Q6ZUJ8 805 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 ERICH1Q86X53 443 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 SPICE1Q8N0Z3 855 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PROCA1Q8NCQ7 364 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PLIN2Q99541 437 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 SELENOSQ9BQE4 189 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 OSBPL1AQ9BXW6 950 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 NUCKS1Q9H1E3 243 aaKnown RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 NEUROG2Q9H2A3 272 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PAPOLBQ9NRJ5 636 aaKnown RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 AGAP1Q9UPQ3 857 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PAPPAQ13219 1627 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 STXBP3O00186 592 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 NKRFO15226 690 aaKnown RBP eCLIP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 SART1O43290 800 aaKnown RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 EVI5O60447 810 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 SMIM24O75264 130 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 CHN1P15882 459 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 ATP4AP20648 1035 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 KIF5BP33176 963 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 CTCFP49711 727 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 TAF11Q15544 211 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 IFI16Q16666 785 aaKnown RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 ANKRD20A2Q5SQ80 823 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 ANKRD20A1Q5TYW2 823 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 ANKRD20A3Q5VUR7 823 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 CHADLQ6NUI6 762 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PIGWQ7Z7B1 504 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 STAG2Q8N3U4 1231 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 KCNH5Q8NCM2 988 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 TNFRSF25Q93038 417 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 KCNMB3Q9NPA1 279 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 LUC7LQ9NQ29 371 aaKnown RBP7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PNMA2Q9UL42 364 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 SIK3Q9Y2K2 1263 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 PCDHGC5Q9Y5F6 944 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 AFF2P51816 1311 aa7.92□□□□□ -1.14
CSDE1-201ENST00000261443 KCNK3O14649 394 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 VIMP08670 466 aaKnown RBP7.91□□□□□ -1.14
CSDE1-201ENST00000261443 FERP16591 822 aa7.91□□□□□ -1.14
CSDE1-201ENST00000261443 ATP2A2P16615 1042 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms