RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 PLEKHH3Q7Z736 793 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 NME8Q8N427 588 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 UPF1Q92900 1129 aaKnown RBP eCLIP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 MAP4K1Q92918 833 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 EEF2KMTQ96G04 330 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 CSRNP2Q9H175 543 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 ZSWIM6Q9HCJ5 1215 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 POLD4Q9HCU8 107 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 LZTFL1Q9NQ48 299 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 FAM207AQ9NSI2 230 aaPredicted RBP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 PGK2P07205 417 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 MAP2K1Q02750 393 aaPredicted RBP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 ADAM9Q13443 819 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 CHADLQ6NUI6 762 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 ATG9AQ7Z3C6 839 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 TTC30BQ8N4P2 665 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 GOLGA5Q8TBA6 731 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 UBXN4Q92575 508 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 LARP4BQ92615 738 aaKnown RBP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 ERO1AQ96HE7 468 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 FAM167AQ96KS9 214 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 KATNAL1Q9BW62 490 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 PLA2G12BQ9BX93 195 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 TEX13BQ9BXU2 312 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 ODF2LQ9ULJ1 636 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 KDM6AO15550 1401 aaPredicted RBP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 K7ERI5 159 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 THAP12O43422 761 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 PPP2R3AQ06190 1150 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 PPFIA1Q13136 1202 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 DEFB128Q7Z7B8 93 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 GTF3C2Q8WUA4 911 aaPredicted RBP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 GCOM2Q9BZD3 368 aaPredicted RBP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 IQCGQ9H095 443 aaKnown RBP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 LRRC4BQ9NT99 713 aa6.98□□□□□ -1.29
BRIP1-201ENST00000259008 PIN4Q9Y237 131 aaKnown RBP6.98□□□□□ -1.29
BRIP1-201ENST00000259008 ACTN1P12814 892 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 CPB1P15086 417 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 PDE6CP51160 858 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 KRT83P78385 493 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 MYL7Q01449 175 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 DDR1Q08345 913 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 SNW1Q13573 536 aaKnown RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 FMNL3Q8IVF7 1028 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 OR6B3Q8NGW1 331 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 FAM149B1Q96BN6 582 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 CDCA5Q96FF9 252 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 IRAK4Q9NWZ3 460 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 MAGED2Q9UNF1 606 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 MANSC4A6NHS7 340 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 DCDC2CA8MYV0 355 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 H0YHG0 523 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 ALDH1A1P00352 501 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 GH1P01241 217 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 MYL5Q02045 173 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 ERO1BQ86YB8 467 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 ATG4CQ96DT6 458 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 DYDC2Q96IM9 177 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 HINFPQ9BQA5 517 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 SLIT1O75093 1534 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 SPDYE2BA6NHP3 402 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 SMIM23A6NLE4 172 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 PRPF3O43395 683 aaKnown RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 PQBP1O60828 265 aaKnown RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 EIF3JO75822 258 aaKnown RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 SPDYE6P0CI01 402 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 GCFC2P16383 781 aaKnown RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 CPT1AP50416 773 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 PRELPP51888 382 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 IRX5P78411 483 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 TSTA3Q13630 321 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 ZNF568Q3ZCX4 644 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 VWA3BQ502W6 1294 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 ZBTB9Q96C00 473 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 HEXIM2Q96MH2 286 aaKnown RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 FAM184BQ9ULE4 1060 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 PCDHB7Q9Y5E2 793 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 GGPS1O95749 300 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 DGKHQ86XP1 1220 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 GLT1D1Q96MS3 346 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 RNF208Q9H0X6 261 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 SLC9A2Q9UBY0 812 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 KIF1AQ12756 1690 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 WDR64B1ANS9 1081 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 PFKFB1P16118 471 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 ABCB4P21439 1286 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 LONP1P36776 959 aaKnown RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 MCM6Q14566 821 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 CASC4Q6P4E1 433 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 C3orf67Q6ZVT6 689 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 TEX2Q8IWB9 1127 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 RASEFQ8IZ41 740 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 ENAHQ8N8S7 591 aaPredicted RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 IGSF22Q8N9C0 903 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 SREK1Q8WXA9 508 aaKnown RBP6.97□□□□□ -1.29
BRIP1-201ENST00000259008 LPAR1Q92633 364 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 AIFM3Q96NN9 605 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 LMCD1Q9NZU5 365 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 STAP2Q9UGK3 403 aa6.97□□□□□ -1.29
BRIP1-201ENST00000259008 MTUS1Q9ULD2 1270 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms