RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 DACT1Q9NYF0 836 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 TBC1D7Q9P0N9 293 aa14.73□□□□□ -0.05
PRPF38A-201ENST00000257181 UNCXA6NJT0 531 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 ERCC5P28715 1186 aaPredicted RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 HS1BP3Q53T59 392 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 ADALQ6DHV7 355 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 CPLX3Q8WVH0 158 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 ZNF560Q96MR9 790 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 MMS19Q96T76 1030 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 ARMCX3Q9UH62 379 aaPredicted RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 E7EVH7 732 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 F5H6K3 240 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 POLRMTO00411 1230 aaKnown RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 KLRC3Q07444 240 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 EFHBQ8N7U6 833 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 ZNF521Q96K83 1311 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 GPR75-ASB3A0A0A6YYF3 556 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 PDE6CP51160 858 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 LACTBP83111 547 aaPredicted RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 DSTYKQ6XUX3 929 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 YAF2Q8IY57 180 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 DYDC1Q8WWB3 177 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 CTNND2Q9UQB3 1225 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 PSMC2P35998 433 aaKnown RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 DNM1Q05193 864 aaKnown RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 SPATA33Q96N06 139 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 TMEM51Q9NW97 253 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 PCDHA6Q9UN73 950 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 PCDHA8Q9Y5H6 950 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 GBP1P32455 592 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 PIK3CAP42336 1068 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 MAPK6Q16659 721 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 MUM1L1Q5H9M0 696 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 EFCAB13Q8IY85 973 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 TTC16Q8NEE8 873 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 LARP4BQ92615 738 aaKnown RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 NT5C1BQ96P26 610 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 RAVER2Q9HCJ3 691 aaKnown RBP14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 FAM50BQ9Y247 325 aa14.72□□□□□ -0.05
PRPF38A-201ENST00000257181 P4HBP07237 508 aaKnown RBP14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 GOLGA8HP0CJ92 632 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 OAZ1P54368 228 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 HMGCS2P54868 508 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 NLRP12P59046 1061 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 PLCB3Q01970 1234 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 TRIM50Q86XT4 487 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 SMAP1Q8IYB5 467 aaPredicted RBP14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 CCDC26Q8TAB7 109 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 NSUN4Q96CB9 384 aaKnown RBP14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 MTRQ99707 1265 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 SLC38A7Q9NVC3 462 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 PSMC5P62195 406 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 PPATQ06203 517 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 C12orf60Q5U649 245 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 C15orf52Q6ZUT6 534 aaKnown RBP14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 TAX1BP1Q86VP1 789 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 UBE2Q2Q8WVN8 375 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 PHKBQ93100 1093 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 RUNDC3BQ96NL0 473 aa14.71□□□□□ -0.05
PRPF38A-201ENST00000257181 TBX3O15119 743 aa14.71□□□□□ -0.06
PRPF38A-201ENST00000257181 PDIA3P30101 505 aaKnown RBP14.71□□□□□ -0.06
PRPF38A-201ENST00000257181 TECP42680 631 aa14.71□□□□□ -0.06
PRPF38A-201ENST00000257181 TMTC3Q6ZXV5 915 aa14.71□□□□□ -0.06
PRPF38A-201ENST00000257181 SPZ1Q9BXG8 430 aa14.71□□□□□ -0.06
PRPF38A-201ENST00000257181 PIDD1Q9HB75 910 aa14.71□□□□□ -0.06
PRPF38A-201ENST00000257181 PARVGQ9HBI0 331 aa14.71□□□□□ -0.06
PRPF38A-201ENST00000257181 INCENPQ9NQS7 918 aa14.71□□□□□ -0.06
PRPF38A-201ENST00000257181 SYNGAP1Q96PV0 1343 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 SLIT3O75094 1523 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 MYL7Q01449 175 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 MTMR2Q13614 643 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 DGKDQ16760 1214 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 DHTKD1Q96HY7 919 aaPredicted RBP14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 EFCC1Q9HA90 598 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 PRDX5P30044 214 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 ATP5DP30049 168 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 SNX17Q15036 470 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 CDC42EP5Q6NZY7 148 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 LEKR1Q6ZMV7 388 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 PROCA1Q8NCQ7 364 aaPredicted RBP14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 LARP6Q9BRS8 491 aaKnown RBP14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 HMGB1P1B2RPK0 211 aaPredicted RBP14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 SPOPO43791 374 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 EIF2AK2P19525 551 aaKnown RBP14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 PTK2Q05397 1052 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 PRPSAP1Q14558 356 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 MXD4Q14582 209 aaPredicted RBP14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 DEFB115Q30KQ5 88 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 C16orf86Q6ZW13 317 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 CEP112Q8N8E3 955 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 KCND2Q9NZV8 630 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 RIOK3O14730 519 aaKnown RBP14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 CMA1P23946 247 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 PLCB4Q15147 1175 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 PPP1R14CQ8TAE6 165 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 JADE2Q9NQC1 790 aa14.7□□□□□ -0.06
PRPF38A-201ENST00000257181 KNDC1Q76NI1 1749 aa14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 POLR2DO15514 142 aaKnown RBP14.69□□□□□ -0.06
PRPF38A-201ENST00000257181 GNRH1P01148 92 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms