RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 SF3B2Q13435 895 aaKnown RBP19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 CNBD1Q8NA66 436 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 ZC3H12CQ9C0D7 883 aaKnown RBP19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 SEC24CP53992 1094 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 HAUS3Q68CZ6 603 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 PDXDC2PQ6P474 469 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 SLCO1A2P46721 670 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 VPS41P49754 854 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 CALCOCO2Q13137 446 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 MEX3CQ5U5Q3 659 aaKnown RBP19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 GIMAP8Q8ND71 665 aaPredicted RBP19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 ARL8AQ96BM9 186 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 NT5C3AQ9H0P0 336 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 VIPAS39Q9H9C1 493 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 PIK3C2AO00443 1686 aa19.24■□□□□ 0.67
NDFIP1-201ENST00000253814 FAM205AQ6ZU69 1335 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 TARSL2A2RTX5 802 aaKnown RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 CLTAP09496 248 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 KCTD19Q17RG1 926 aaPredicted RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 WDR93Q6P2C0 686 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 STXBP4Q6ZWJ1 553 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 NSUN4Q96CB9 384 aaKnown RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 NSRP1Q9H0G5 558 aaKnown RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 RHOBTB3O94955 611 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 EVX2Q03828 476 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 GKAP1Q5VSY0 366 aaPredicted RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 TPH2Q8IWU9 490 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 CCDC105Q8IYK2 499 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 ANKRD42Q8N9B4 389 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 BSDC1Q9NW68 430 aaPredicted RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 USP17L5A8MUK1 530 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 E9PMD0 336 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 DDX39AO00148 427 aaKnown RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 SERPING1P05155 500 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 RPSAP08865 295 aaKnown RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 APBA1Q02410 837 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 KCNB1Q14721 858 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 FAM182BQ5T319 152 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 UNC13DQ70J99 1090 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 OR2W6PQ8NHA6 318 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 MED15Q96RN5 788 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 MYCBPQ99417 103 aaPredicted RBP19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 EMILIN3Q9NT22 766 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 FRMD4BQ9Y2L6 1034 aa19.23■□□□□ 0.67
NDFIP1-201ENST00000253814 RGS16O15492 202 aaPredicted RBP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 GFPT2O94808 682 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 KLRK1P26718 216 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 SCNN1DP51172 638 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 PLTPP55058 493 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 FAM98CQ17RN3 349 aaKnown RBP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 ALKBH5Q6P6C2 394 aaKnown RBP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 TACO1Q9BSH4 297 aaKnown RBP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 BARHL2Q9NY43 387 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 CALUO43852 315 aaPredicted RBP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 ADCY1Q08828 1119 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 ZNF622Q969S3 477 aaKnown RBP eCLIP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 ATP6V0A2Q9Y487 856 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 EXOC3O60645 756 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 LRRN2O75325 713 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 CDK8P49336 464 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 TBC1D10BQ4KMP7 808 aaPredicted RBP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 DENND2CQ68D51 928 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 CCDC50Q8IVM0 306 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 ZIM3Q96PE6 472 aa19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 PDS5AQ29RF7 1337 aaKnown RBP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
NDFIP1-201ENST00000253814 SFI1A8K8P3 1242 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 CORO7P57737 925 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 SH2D4AQ9H788 454 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 RIC8AQ9NPQ8 531 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 STK17AQ9UEE5 414 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 ZSCAN5CA6NGD5 496 aaPredicted RBP19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 PGRMC1O00264 195 aaKnown RBP19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 CTNND1O60716 968 aaKnown RBP19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 CLNS1AP54105 237 aaKnown RBP19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 ACTN3Q08043 901 aaPredicted RBP19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 DDX42Q86XP3 938 aaKnown RBP eCLIP19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 CLEC10AQ8IUN9 316 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 ZNF34Q8IZ26 560 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 CCSER1Q9C0I3 900 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 PRPF6O94906 941 aaKnown RBP19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 LRRC63Q05C16 580 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 MARCH10Q8NA82 808 aaPredicted RBP19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 GGA1Q9UJY5 639 aa19.21■□□□□ 0.67
NDFIP1-201ENST00000253814 PDE2AO00408 941 aaPredicted RBP19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 GNA14O95837 355 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 MYBL2P10244 700 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 MTMR3Q13615 1198 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 SEL1L2Q5TEA6 688 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 MCTP2Q6DN12 878 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 DNAAF5Q86Y56 855 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 TCP11Q8WWU5 503 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 STK38LQ9Y2H1 464 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 PCDHA1Q9Y5I3 950 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 CD2APQ9Y5K6 639 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 MYMKA6NI61 221 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 FGFR2P21802 821 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 PRPHP41219 470 aa19.2■□□□□ 0.66
NDFIP1-201ENST00000253814 ZYXQ15942 572 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms