RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 WDR59Q6PJI9 974 aa18.88■□□□□ 0.61
FOXA1-201ENST00000250448 ZNF507Q8TCN5 953 aa18.88■□□□□ 0.61
FOXA1-201ENST00000250448 ZBED3Q96IU2 234 aaPredicted RBP18.88■□□□□ 0.61
FOXA1-201ENST00000250448 FZD9O00144 591 aa18.88■□□□□ 0.61
FOXA1-201ENST00000250448 CKAP4Q07065 602 aaKnown RBP18.88■□□□□ 0.61
FOXA1-201ENST00000250448 PES1O00541 588 aaKnown RBP18.87■□□□□ 0.61
FOXA1-201ENST00000250448 GOLGA6L1Q8N7Z2 621 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 EHBP1Q8NDI1 1231 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 THAP9Q9H5L6 903 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 HPCAL4Q9UM19 191 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 TFR2Q9UP52 801 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 TARSL2A2RTX5 802 aaKnown RBP18.87■□□□□ 0.61
FOXA1-201ENST00000250448 STXBP3O00186 592 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 PMS1P54277 932 aaKnown RBP18.87■□□□□ 0.61
FOXA1-201ENST00000250448 KRT83P78385 493 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 ZNF662Q6ZS27 426 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 KIAA1328Q86T90 577 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 JAKMIP2Q96AA8 810 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 RPGRIP1Q96KN7 1286 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 SPZ1Q9BXG8 430 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 DISC1Q9NRI5 854 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 GREB1LQ9C091 1923 aaPredicted RBP18.87■□□□□ 0.61
FOXA1-201ENST00000250448 SRGAP2O75044 1071 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 SYF2O95926 243 aaKnown RBP18.87■□□□□ 0.61
FOXA1-201ENST00000250448 ZNF543Q08ER8 600 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 RASA3Q14644 834 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 LRRC31Q6UY01 552 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 SPICE1Q8N0Z3 855 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 C4orf32Q8N8J7 132 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 AFAP1L1Q8TED9 768 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 CAPZA3Q96KX2 299 aa18.87■□□□□ 0.61
FOXA1-201ENST00000250448 LTBP3Q9NS15 1303 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 PRPF6O94906 941 aaKnown RBP18.86■□□□□ 0.61
FOXA1-201ENST00000250448 ECE1P42892 770 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 MEA1Q16626 185 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 COA7Q96BR5 231 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 RRP36Q96EU6 259 aaKnown RBP18.86■□□□□ 0.61
FOXA1-201ENST00000250448 TRIM47Q96LD4 638 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 RSPH14Q9UHP6 348 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 A0A1W2PRG0 241 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 SNHG28P0DPA3 235 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 NAPAP54920 295 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 SNAP25P60880 206 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 KCNB1Q14721 858 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 PRAMEF18Q5VWM3 479 aa18.86■□□□□ 0.61
FOXA1-201ENST00000250448 MAGEC2Q9UBF1 373 aaPredicted RBP18.86■□□□□ 0.61
FOXA1-201ENST00000250448 KRT86O43790 486 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 CYLC1P35663 651 aaPredicted RBP18.85■□□□□ 0.61
FOXA1-201ENST00000250448 STIM1Q13586 685 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 LZTS2Q9BRK4 669 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 BARHL2Q9NY43 387 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 SEC63Q9UGP8 760 aaKnown RBP18.85■□□□□ 0.61
FOXA1-201ENST00000250448 ZC3H4Q9UPT8 1303 aaKnown RBP18.85■□□□□ 0.61
FOXA1-201ENST00000250448 NAALADL2Q58DX5 795 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 SLFN13Q68D06 897 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 ADGRF4Q8IZF3 695 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 BLIDQ8IZY5 108 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 ACER1Q8TDN7 264 aa18.85■□□□□ 0.61
FOXA1-201ENST00000250448 ARFGEF1Q9Y6D6 1849 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 USP17L10C9JJH3 530 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 PSMA7O14818 248 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 CALML3P27482 149 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 DNM2P50570 870 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 ZNF280AP59817 542 aaPredicted RBP18.84■□□□□ 0.61
FOXA1-201ENST00000250448 ZYXQ15942 572 aaKnown RBP18.84■□□□□ 0.61
FOXA1-201ENST00000250448 ASPRV1Q53RT3 343 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 COG1Q8WTW3 980 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 KLRC4O43908 158 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 SLC1A4P43007 532 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 ILDR2Q71H61 639 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 CAGE1Q8TC20 777 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 TTYH3Q9C0H2 523 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 RIOX1Q9H6W3 641 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 JMJD4Q9H9V9 463 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 NYAP2Q9P242 653 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 HERC5Q9UII4 1024 aaKnown RBP18.84■□□□□ 0.61
FOXA1-201ENST00000250448 FZD1Q9UP38 647 aa18.84■□□□□ 0.61
FOXA1-201ENST00000250448 B4DLN1 442 aa18.83■□□□□ 0.61
FOXA1-201ENST00000250448 FAM43BQ6ZT52 329 aaPredicted RBP18.83■□□□□ 0.61
FOXA1-201ENST00000250448 RASSF8Q8NHQ8 419 aa18.83■□□□□ 0.61
FOXA1-201ENST00000250448 NOC3LQ8WTT2 800 aaKnown RBP18.83■□□□□ 0.61
FOXA1-201ENST00000250448 SYT17Q9BSW7 474 aa18.83■□□□□ 0.61
FOXA1-201ENST00000250448 HACL1Q9UJ83 578 aa18.83■□□□□ 0.61
FOXA1-201ENST00000250448 PCDHA4Q9UN74 947 aa18.83■□□□□ 0.61
FOXA1-201ENST00000250448 ANO9A1A5B4 782 aa18.83■□□□□ 0.6
FOXA1-201ENST00000250448 F5H6K3 240 aa18.83■□□□□ 0.6
FOXA1-201ENST00000250448 KLRC3Q07444 240 aa18.83■□□□□ 0.6
FOXA1-201ENST00000250448 TTI2Q6NXR4 508 aa18.83■□□□□ 0.6
FOXA1-201ENST00000250448 LACRTQ9GZZ8 138 aa18.83■□□□□ 0.6
FOXA1-201ENST00000250448 EXOC1Q9NV70 894 aa18.83■□□□□ 0.6
FOXA1-201ENST00000250448 ZNHIT6Q9NWK9 470 aaKnown RBP18.83■□□□□ 0.6
FOXA1-201ENST00000250448 RCCD1A6NED2 376 aa18.83■□□□□ 0.6
FOXA1-201ENST00000250448 PPP1R11O60927 126 aaPredicted RBP18.83■□□□□ 0.6
FOXA1-201ENST00000250448 TAL1P17542 331 aaPredicted RBP18.83■□□□□ 0.6
FOXA1-201ENST00000250448 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.6
FOXA1-201ENST00000250448 SMCO2A6NFE2 343 aa18.82■□□□□ 0.6
FOXA1-201ENST00000250448 EIF3CLB5ME19 914 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms