RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PHF20L1A8MW92 1017 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 EEF1B2P24534 225 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 DBN1Q16643 649 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 KRT26Q7Z3Y9 468 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 ARMCX3Q9UH62 379 aaPredicted RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 COPB2P35606 906 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 SLC1A4P43007 532 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 TRAPPC10P48553 1259 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 BBS9Q3SYG4 887 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 LRRC23Q53EV4 343 aaPredicted RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 USP37Q86T82 979 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 SYNE4Q8N205 404 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 P2RX5Q93086 422 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 HDAC11Q96DB2 347 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 UBE2TQ9NPD8 197 aaPredicted RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 PIH1D3Q9NQM4 214 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 ASAP1Q9ULH1 1129 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 TCP10L2B9ZVM9 353 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 PSMD2Q13200 908 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 CCDC14Q49A88 953 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 ARL8AQ96BM9 186 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 SPATA17Q96L03 361 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 PPARGC1AQ9UBK2 798 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 SEC24DO94855 1032 aaPredicted RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 PARP9Q8IXQ6 854 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 ZC3H12CQ9C0D7 883 aaKnown RBP8.17□□□□□ -1.1
RIF1-201ENST00000243326 DAAM1Q9Y4D1 1078 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 PIK3R2O00459 728 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 LPIN2Q92539 896 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 TM6SF1Q9BZW5 370 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 TMEM260Q9NX78 707 aa8.17□□□□□ -1.1
RIF1-201ENST00000243326 GOLGA8RI6L899 631 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 CDC25CP30307 473 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 KIF11P52732 1056 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 LINC00301Q8NCQ3 95 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 SNRNP27Q8WVK2 155 aaKnown RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 TSKSQ9UJT2 592 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 NMT2O60551 498 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 FMNL1O95466 1100 aaPredicted RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 STRN3Q13033 797 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 DBR1Q9UK59 544 aaKnown RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 PASKQ96RG2 1323 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 MB21D1Q8N884 522 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 CDC26Q8NHZ8 85 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 PSTPIP2Q9H939 334 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 CD58P19256 250 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 DR1Q01658 176 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 OSBP2Q969R2 916 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 CHORDC1Q9UHD1 332 aaPredicted RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 SYNMO15061 1565 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 DNMT1P26358 1616 aaKnown RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 KRT10P13645 584 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 NLRP14Q86W24 1093 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 C1orf54Q8WWF1 131 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 MMS19Q96T76 1030 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 SLC52A2Q9HAB3 445 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 RAD23BP54727 409 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 JADE1Q6IE81 842 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 PHLDB3Q6NSJ2 640 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 SRRM1Q8IYB3 904 aaKnown RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 RYBPQ8N488 228 aaPredicted RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 TCP1P17987 556 aaKnown RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 CUL4AQ13619 759 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 SAYSD1Q9NPB0 183 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 USP40Q9NVE5 1235 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 TAF6LQ9Y6J9 622 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 TESPA1A2RU30 521 aaPredicted RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 AGRPO00253 132 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 LUC7L3O95232 432 aaKnown RBP8.16□□□□□ -1.1
RIF1-201ENST00000243326 KCNA6P17658 529 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 PHEXP78562 749 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 PPP4R1Q8TF05 950 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 GCNT4Q9P109 453 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 RCOR1Q9UKL0 485 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 FAM135BQ49AJ0 1406 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 USP17L8P0C7I0 530 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 PDE6CP51160 858 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 EPHB1P54762 984 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 IL9RQ01113 521 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 HAUS4Q9H6D7 363 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 SCOCQ9UIL1 159 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 ZFYVE9O95405 1425 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 FGFR4P22455 802 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 ANO4Q32M45 955 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 FAM182BQ5T319 152 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 CYB5R4Q7L1T6 521 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 CHP1Q99653 195 aa8.16□□□□□ -1.1
RIF1-201ENST00000243326 KRT14P02533 472 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 BCRP11274 1271 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 MAPK4P31152 587 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 SMIM5Q71RC9 77 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 PI4K2BQ8TCG2 481 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.15□□□□□ -1.1
RIF1-201ENST00000243326 NEDD4P46934 1319 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 OR52Z1P0C646 297 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 NR2F2P24468 414 aa8.15□□□□□ -1.1
RIF1-201ENST00000243326 SMTNP53814 917 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms