RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 ADGRG1Q9Y653 693 aa18.8■□□□□ 0.6
GAPDH-201ENST00000229239 EGFRP00533 1210 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 TUBB2AQ13885 445 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 DLGAP5Q15398 846 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 Q4G0T1 1027 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 ANKRD40Q6AI12 368 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 MTMR14Q8NCE2 650 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 KIAA0895Q8NCT3 520 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 CPLX3Q8WVH0 158 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 TUBB2BQ9BVA1 445 aa18.79■□□□□ 0.6
GAPDH-201ENST00000229239 SOWAHDA6NJG2 315 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L15C9J2P7 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L13C9JLJ4 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L11C9JVI0 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L18D6R9N7 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L22D6RA61 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L17D6RBQ6 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L19D6RCP7 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L20D6RJB6 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 TBC1D12O60347 775 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 LRRC63Q05C16 580 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 EHHADHQ08426 723 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L24Q0WX57 530 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
GAPDH-201ENST00000229239 TSR1Q2NL82 804 aaKnown RBP18.78■□□□□ 0.6
GAPDH-201ENST00000229239 USP17L6PQ6QN14 398 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 TUBGCP2Q9BSJ2 902 aa18.78■□□□□ 0.6
GAPDH-201ENST00000229239 TMEM88BA6NKF7 163 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 PIK3CDO00329 1044 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 FCER1AP12319 257 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 CASQ1P31415 396 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 SREBF1P36956 1147 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 ZNF280AP59817 542 aaPredicted RBP18.77■□□□□ 0.6
GAPDH-201ENST00000229239 ARHGAP4P98171 946 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 HAUS3Q68CZ6 603 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 RAD9BQ6WBX8 426 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 ZNF70Q9UC06 446 aaPredicted RBP18.77■□□□□ 0.6
GAPDH-201ENST00000229239 SPDYE3A6NKU9 549 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 KIF20AO95235 890 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 CIITAP33076 1130 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 KRT9P35527 623 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 KIF4BQ2VIQ3 1234 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 SPDYE2Q495Y8 402 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 FIGNQ5HY92 759 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 CREBRFQ8IUR6 639 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 OR8K1Q8NGG5 319 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 DDX12PQ92771 950 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 CNOT6LQ96LI5 555 aaKnown RBP18.77■□□□□ 0.6
GAPDH-201ENST00000229239 CCDC94Q9BW85 323 aaPredicted RBP18.77■□□□□ 0.6
GAPDH-201ENST00000229239 GOPCQ9HD26 462 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 MYO1AQ9UBC5 1043 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 CAPN11Q9UMQ6 739 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 TMX2Q9Y320 296 aa18.77■□□□□ 0.6
GAPDH-201ENST00000229239 MYH7BA7E2Y1 1941 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 TRAF5O00463 557 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 GNG11P61952 73 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 IKQ13123 557 aaPredicted RBP18.76■□□□□ 0.59
GAPDH-201ENST00000229239 GLIPR1L2Q4G1C9 344 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 FAM83AQ86UY5 434 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 ERMNQ8TAM6 284 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 FAM20AQ96MK3 541 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 DNAJC7Q99615 494 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 NUDT12Q9BQG2 462 aa18.76■□□□□ 0.59
GAPDH-201ENST00000229239 LUC7L2Q9Y383 392 aaKnown RBP18.76■□□□□ 0.59
GAPDH-201ENST00000229239 TRPM7Q96QT4 1865 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 KIF5CO60282 957 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 PLA2G6O60733 806 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 STAT2P52630 851 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 FEZ1Q99689 392 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 TSG101Q99816 390 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 GLIS2Q9BZE0 524 aaPredicted RBP18.75■□□□□ 0.59
GAPDH-201ENST00000229239 SEMA6BQ9H3T3 888 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 SLC39A2Q9NP94 309 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 CYP3A4P08684 503 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 PRKCSHP14314 528 aaPredicted RBP18.75■□□□□ 0.59
GAPDH-201ENST00000229239 MTIF2P46199 727 aaKnown RBP18.75■□□□□ 0.59
GAPDH-201ENST00000229239 TUBB4BP68371 445 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 JAG1P78504 1218 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 MTF1Q14872 753 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 FKBP15Q5T1M5 1219 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 ETNPPLQ8TBG4 499 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 ERGIC2Q96RQ1 377 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 DESI2Q9BSY9 194 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 SH2D4AQ9H788 454 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 PRR12Q9ULL5 1215 aa18.75■□□□□ 0.59
GAPDH-201ENST00000229239 A0A1W2PQJ5 194 aa18.74■□□□□ 0.59
GAPDH-201ENST00000229239 A0A1W2PRG0 241 aa18.74■□□□□ 0.59
GAPDH-201ENST00000229239 TCP10L2B9ZVM9 353 aa18.74■□□□□ 0.59
GAPDH-201ENST00000229239 RRP1BQ14684 758 aaKnown RBP18.74■□□□□ 0.59
GAPDH-201ENST00000229239 KCNK18Q7Z418 384 aa18.74■□□□□ 0.59
GAPDH-201ENST00000229239 CCDC65Q8IXS2 484 aa18.74■□□□□ 0.59
GAPDH-201ENST00000229239 DNAJC19Q96DA6 116 aa18.74■□□□□ 0.59
GAPDH-201ENST00000229239 MYOZ2Q9NPC6 264 aa18.74■□□□□ 0.59
GAPDH-201ENST00000229239 PITPNM2Q9BZ72 1349 aa18.74■□□□□ 0.59
GAPDH-201ENST00000229239 URI1O94763 535 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-201ENST00000229239 ERVK-24P63145 666 aa18.73■□□□□ 0.59
GAPDH-201ENST00000229239 TBC1D8BQ0IIM8 1120 aa18.73■□□□□ 0.59
GAPDH-201ENST00000229239 DYMQ7RTS9 669 aa18.73■□□□□ 0.59
GAPDH-201ENST00000229239 ZNF397Q8NF99 534 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-201ENST00000229239 CHURC1Q8WUH1 139 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms