RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PP2D1A8MPX8 630 aa27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 FGFR1OPO95684 399 aaKnown RBP27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 PMS1P54277 932 aaKnown RBP27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 MIGA2Q7L4E1 593 aa27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 ERGIC2Q96RQ1 377 aa27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 EPC1Q9H2F5 836 aa27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 KANSL2Q9H9L4 492 aa27.74■■■□□ 2.03
RUNDC3A-201ENST00000225441 COBLO75128 1261 aa27.73■■■□□ 2.03
RUNDC3A-201ENST00000225441 PDE4DQ08499 809 aa27.73■■■□□ 2.03
RUNDC3A-201ENST00000225441 BEND6Q5SZJ8 279 aaPredicted RBP27.73■■■□□ 2.03
RUNDC3A-201ENST00000225441 RIOX1Q9H6W3 641 aa27.73■■■□□ 2.03
RUNDC3A-201ENST00000225441 ST7Q9NRC1 585 aa27.73■■■□□ 2.03
RUNDC3A-201ENST00000225441 A0A0U1RQJ8 604 aa27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 EIF3CLB5ME19 914 aaKnown RBP27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 CCNT1O60563 726 aaKnown RBP27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 EIF3JO75822 258 aaKnown RBP27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 JAG1P78504 1218 aa27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 SEPT2Q15019 361 aa27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 ATRIPQ8WXE1 791 aa27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 EIF3CQ99613 913 aaKnown RBP27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 CHP1Q99653 195 aa27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 PUF60Q9UHX1 559 aaKnown RBP27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 REXO2Q9Y3B8 237 aaKnown RBP27.72■■■□□ 2.03
RUNDC3A-201ENST00000225441 GLTPD2A6NH11 291 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 KRT86O43790 486 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 IPO7O95373 1038 aaKnown RBP27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 GH2P01242 217 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 FXR2P51116 673 aaKnown RBP eCLIP27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 WDR93Q6P2C0 686 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 TRAPPC11Q7Z392 1133 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 LRRC47Q8N1G4 583 aaKnown RBP27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 RAB34Q9BZG1 259 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 NYAP2Q9P242 653 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 OAS2P29728 719 aaKnown RBP27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 LETM2Q2VYF4 491 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 PAPD7Q5XG87 772 aaKnown RBP27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 PPP1R18Q6NYC8 613 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 WDR59Q6PJI9 974 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 REXO1Q8N1G1 1221 aaKnown RBP27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 PSD3Q9NYI0 1048 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 MTMR7Q9Y216 660 aa27.71■■■□□ 2.03
RUNDC3A-201ENST00000225441 PITPNM2Q9BZ72 1349 aa27.7■■■□□ 2.03
RUNDC3A-201ENST00000225441 ASIC1P78348 528 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 ICA1Q05084 483 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 TBC1D8BQ0IIM8 1120 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 PDIA5Q14554 519 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 ASPRV1Q53RT3 343 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 FKBP15Q5T1M5 1219 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 TSGA10Q9BZW7 698 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 CALCOCO1Q9P1Z2 691 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 PPP2R3BQ9Y5P8 575 aa27.7■■■□□ 2.02
RUNDC3A-201ENST00000225441 ANO9A1A5B4 782 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 EEF2P13639 858 aaKnown RBP27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 ATP2B2Q01814 1243 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 CKAP4Q07065 602 aaKnown RBP27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 SV2BQ7L1I2 683 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 TXLNBQ8N3L3 684 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 HNRNPH3P31942 346 aaKnown RBP27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 TMEM266Q2M3C6 531 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 NBPF12Q5TAG4 269 aaPredicted RBP27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 CENPPQ6IPU0 288 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 MKL1Q969V6 931 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 CNOT6LQ96LI5 555 aaKnown RBP27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 MTMR9Q96QG7 549 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 L1RE1Q9UN81 338 aa27.69■■■□□ 2.02
RUNDC3A-201ENST00000225441 TRIM21P19474 475 aaKnown RBP27.68■■■□□ 2.02
RUNDC3A-201ENST00000225441 ANKRD40Q6AI12 368 aa27.68■■■□□ 2.02
RUNDC3A-201ENST00000225441 UNC13DQ70J99 1090 aa27.68■■■□□ 2.02
RUNDC3A-201ENST00000225441 ACBD3Q9H3P7 528 aa27.68■■■□□ 2.02
RUNDC3A-201ENST00000225441 ZBTB21Q9ULJ3 1066 aa27.68■■■□□ 2.02
RUNDC3A-201ENST00000225441 B4DLN1 442 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 SLC26A4O43511 780 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 CAP2P40123 477 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 MTIF2P46199 727 aaKnown RBP27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 HERVK_113P62684 666 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 PSMD2Q13200 908 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 SIAH1Q8IUQ4 282 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 TBCKQ8TEA7 893 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 LRRC15Q8TF66 581 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 GOLGA8HP0CJ92 632 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 PDHBP11177 359 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 CCDC122Q5T0U0 273 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 EXOC4Q96A65 974 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 HOOK2Q96ED9 719 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 MMTAG2Q9BU76 263 aaKnown RBP27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 ZSWIM4Q9H7M6 989 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 GUCA1BQ9UMX6 200 aa27.67■■■□□ 2.02
RUNDC3A-201ENST00000225441 MYH4Q9Y623 1939 aa27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 USP17L5A8MUK1 530 aa27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 PHF20L1A8MW92 1017 aa27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 PES1O00541 588 aaKnown RBP27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 SNHG28P0DPA3 235 aa27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 STK4Q13043 487 aa27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 USP50Q70EL3 339 aaPredicted RBP27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 KIAA1328Q86T90 577 aa27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 NOC4LQ9BVI4 516 aaKnown RBP27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 EDEM3Q9BZQ6 932 aa27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 SAR1BQ9Y6B6 198 aa27.66■■■□□ 2.02
RUNDC3A-201ENST00000225441 TARSL2A2RTX5 802 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms