RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 KLRC3Q07444 240 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 RBM26Q5T8P6 1007 aaKnown RBP24.67■■□□□ 1.54
CCDC9-201ENST00000221922 CENPPQ6IPU0 288 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 TXLNBQ8N3L3 684 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 ABCB6Q9NP58 842 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 TRIM10Q9UDY6 481 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 GUCA1BQ9UMX6 200 aa24.67■■□□□ 1.54
CCDC9-201ENST00000221922 SLC26A4O43511 780 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 MTIF2P46199 727 aaKnown RBP24.66■■□□□ 1.54
CCDC9-201ENST00000221922 GBP3Q9H0R5 595 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 VPS33BQ9H267 617 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 KDM3AQ9Y4C1 1321 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 B4DLN1 442 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 FGFR1OPO95684 399 aaKnown RBP24.66■■□□□ 1.54
CCDC9-201ENST00000221922 RHOXF2BP0C7M4 288 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 VSNL1P62760 191 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 KRT83P78385 493 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 PSMD2Q13200 908 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 GPS2Q13227 327 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 MCTP2Q6DN12 878 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 IQCDQ96DY2 449 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 RHOXF2Q9BQY4 288 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 PCDHA1Q9Y5I3 950 aa24.66■■□□□ 1.54
CCDC9-201ENST00000221922 COL4A5P29400 1685 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 RAD21O60216 631 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 NDUFB10O96000 172 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 GH2P01242 217 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 GUF1Q8N442 669 aaKnown RBP24.65■■□□□ 1.54
CCDC9-201ENST00000221922 NOA1Q8NC60 698 aaKnown RBP24.65■■□□□ 1.54
CCDC9-201ENST00000221922 SLC39A2Q9NP94 309 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 PSD3Q9NYI0 1048 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 HDAC9Q9UKV0 1011 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 RASSF10A6NK89 507 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 KCNA3P22001 575 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 USP11P51784 963 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 TBC1D8BQ0IIM8 1120 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 WDR93Q6P2C0 686 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 LARGE2Q8N3Y3 721 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 HAS1Q92839 578 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 EXOC4Q96A65 974 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 NOC4LQ9BVI4 516 aaKnown RBP24.65■■□□□ 1.54
CCDC9-201ENST00000221922 NT5C3AQ9H0P0 336 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 PCDHA12Q9UN75 941 aa24.65■■□□□ 1.54
CCDC9-201ENST00000221922 BAG6P46379 1132 aa24.64■■□□□ 1.53
CCDC9-201ENST00000221922 JAG1P78504 1218 aa24.64■■□□□ 1.53
CCDC9-201ENST00000221922 FKBP15Q5T1M5 1219 aa24.64■■□□□ 1.53
CCDC9-201ENST00000221922 PAPD7Q5XG87 772 aaKnown RBP24.64■■□□□ 1.53
CCDC9-201ENST00000221922 NCAPH2Q6IBW4 605 aa24.64■■□□□ 1.53
CCDC9-201ENST00000221922 FOXR2Q6PJQ5 311 aa24.64■■□□□ 1.53
CCDC9-201ENST00000221922 SLC16A10Q8TF71 515 aa24.64■■□□□ 1.53
CCDC9-201ENST00000221922 ABCB11O95342 1321 aa24.64■■□□□ 1.53
CCDC9-201ENST00000221922 LRRC63Q05C16 580 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 AP3B2Q13367 1082 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 HYIQ5T013 277 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 EHBP1Q8NDI1 1231 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 ERGIC2Q96RQ1 377 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 SEMA6BQ9H3T3 888 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 DPEP1P16444 411 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 TRIM21P19474 475 aaKnown RBP24.63■■□□□ 1.53
CCDC9-201ENST00000221922 ZBED6P86452 979 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 RRP1BQ14684 758 aaKnown RBP24.63■■□□□ 1.53
CCDC9-201ENST00000221922 DLGAP5Q15398 846 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 FIGNQ5HY92 759 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 CCDC122Q5T0U0 273 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 MOXD1Q6UVY6 613 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 BTNL9Q6UXG8 535 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 DYMQ7RTS9 669 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 CCDC170Q8IYT3 715 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 FAM151AQ8WW52 585 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 NUDT12Q9BQG2 462 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 AMNQ9BXJ7 453 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 PDE11AQ9HCR9 933 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 AGPAT5Q9NUQ2 364 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 ZNF70Q9UC06 446 aaPredicted RBP24.63■■□□□ 1.53
CCDC9-201ENST00000221922 ADAM21Q9UKJ8 722 aa24.63■■□□□ 1.53
CCDC9-201ENST00000221922 EIF3JO75822 258 aaKnown RBP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 RAD17O75943 681 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 HNRNPH2P55795 449 aaKnown RBP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 CDK17Q00537 523 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 SYDE2Q5VT97 1194 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 DDX12PQ92771 950 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 ZNHIT6Q9NWK9 470 aaKnown RBP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 EIF3CLB5ME19 914 aaKnown RBP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 BMP3P12645 472 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 CYLC1P35663 651 aaPredicted RBP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 MIIPQ5JXC2 388 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 OGFOD1Q8N543 542 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 NEK11Q8NG66 645 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 HPS3Q969F9 1004 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 EIF3CQ99613 913 aaKnown RBP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 ANO3Q9BYT9 981 aa24.62■■□□□ 1.53
CCDC9-201ENST00000221922 ZNF277Q9NRM2 450 aaPredicted RBP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 BMP2KQ9NSY1 1161 aaPredicted RBP24.62■■□□□ 1.53
CCDC9-201ENST00000221922 CYP3A7-CYP3A51PA0A087WV96 503 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 A0A1W2PQJ5 194 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 TCP10L2B9ZVM9 353 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L15C9J2P7 530 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L13C9JLJ4 530 aa24.61■■□□□ 1.53
CCDC9-201ENST00000221922 USP17L11C9JVI0 530 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms