RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 MAGEF1Q9HAY2 307 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 PACSIN2Q9UNF0 486 aaPredicted RBP10.66□□□□□ -0.7
TUBB1-201ENST00000217133 GMNCA6NCL1 334 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 NKRFO15226 690 aaKnown RBP eCLIP10.66□□□□□ -0.7
TUBB1-201ENST00000217133 DRP2Q13474 957 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 PLCB4Q15147 1175 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 TXNRD1Q16881 649 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 LETM2Q2VYF4 491 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 LRRC45Q96CN5 670 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 CDK5RAP3Q96JB5 506 aa10.66□□□□□ -0.7
TUBB1-201ENST00000217133 PJA2O43164 708 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 MMP14P50281 582 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 ITGB3BPQ13352 177 aaPredicted RBP10.65□□□□□ -0.7
TUBB1-201ENST00000217133 RUFY4Q6ZNE9 571 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 CPLX4Q7Z7G2 160 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 CD302Q8IX05 232 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 CACNA2D3Q8IZS8 1091 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 MREGQ8N565 214 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 UBLCP1Q8WVY7 318 aaPredicted RBP10.65□□□□□ -0.7
TUBB1-201ENST00000217133 SIK3Q9Y2K2 1263 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 BACH1O14867 736 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 RAD51CO43502 376 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 PCP11498 1178 aaKnown RBP10.65□□□□□ -0.7
TUBB1-201ENST00000217133 E2F5Q15329 346 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 TRADDQ15628 312 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 PREPLQ4J6C6 727 aaPredicted RBP10.65□□□□□ -0.7
TUBB1-201ENST00000217133 SFMBT2Q5VUG0 894 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 PDXDC1Q6P996 788 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 DYMQ7RTS9 669 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 CCDC50Q8IVM0 306 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 PARP9Q8IXQ6 854 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 OR2W6PQ8NHA6 318 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 TSG101Q99816 390 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 PAGR1Q9BTK6 254 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.7
TUBB1-201ENST00000217133 MYH10P35580 1976 aa10.65□□□□□ -0.71
TUBB1-201ENST00000217133 MYH6P13533 1939 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 PSEN1P49768 467 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 CDC37Q16543 378 aaPredicted RBP10.64□□□□□ -0.71
TUBB1-201ENST00000217133 KIAA0753Q2KHM9 967 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 SV2BQ7L1I2 683 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 BRIP1Q9BX63 1249 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 TAF1DQ9H5J8 278 aaPredicted RBP10.64□□□□□ -0.71
TUBB1-201ENST00000217133 TMBIM4Q9HC24 238 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 THSD7AQ9UPZ6 1657 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 NUP188Q5SRE5 1749 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 GRID2IPA4D2P6 1211 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 KCNK3O14649 394 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 CLGNO14967 610 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 CCNT1O60563 726 aaKnown RBP10.64□□□□□ -0.71
TUBB1-201ENST00000217133 LCA5LO95447 670 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 OR52Z1P0C646 297 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 CHRM1P11229 460 aaPredicted RBP10.64□□□□□ -0.71
TUBB1-201ENST00000217133 IL6STP40189 918 aaPredicted RBP10.64□□□□□ -0.71
TUBB1-201ENST00000217133 GYG1P46976 350 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 PIK3R5Q8WYR1 880 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 HAUS2Q9NVX0 235 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 GGA2Q9UJY4 613 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 SSU72P8A0A1W2PR75 194 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 LAD1O00515 517 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 CEP104O60308 925 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 TMOD1P28289 359 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 TECP42680 631 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 RAPGEF1Q13905 1077 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 RPS6KA1Q15418 735 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 CYB5D1Q6P9G0 228 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 TBC1D5Q92609 795 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 AK8Q96MA6 479 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 C7orf25Q9BPX7 421 aa10.64□□□□□ -0.71
TUBB1-201ENST00000217133 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
TUBB1-201ENST00000217133 RASSF9O75901 435 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 HSPA9P38646 679 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 CLNS1AP54105 237 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 IFFO1Q0D2I5 559 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 CCDC152Q4G0S7 254 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 KIAA0895Q8NCT3 520 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 DDX20Q9UHI6 824 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 PCDHA6Q9UN73 950 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 PCDHA8Q9Y5H6 950 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 TMCO5BA8MYB1 307 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 CLSTN1O94985 981 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 PDHBP11177 359 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 KLRC1P26715 233 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 GBP2P32456 591 aaPredicted RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 HSD17B3P37058 310 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 POLR2FP61218 127 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 CHRNDQ07001 517 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 PTPROQ16827 1216 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 GKAP1Q5VSY0 366 aaPredicted RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 MSL1Q68DK7 614 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 CENPPQ6IPU0 288 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 LRRC15Q8TF66 581 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 SGSM3Q96HU1 749 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 CRNKL1Q9BZJ0 848 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 PLCB1Q9NQ66 1216 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 SH3GLB2Q9NR46 395 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 MCM8Q9UJA3 840 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms