RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 DPEP1P16444 411 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 CYLC1P35663 651 aaPredicted RBP9.18□□□□□ -0.94
VAMP3-201ENST00000054666 ECE1P42892 770 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 ECM1Q16610 540 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 FAM83BQ5T0W9 1011 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 ETNPPLQ8TBG4 499 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 CRYGNQ8WXF5 182 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 KIFC2Q96AC6 838 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 ERGIC2Q96RQ1 377 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 GMLQ99445 158 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 CARD6Q9BX69 1037 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 ARGLU1Q9NWB6 273 aaPredicted RBP9.18□□□□□ -0.94
VAMP3-201ENST00000054666 MYO1AQ9UBC5 1043 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 MRFAP1Q9Y605 127 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 PITPNM2Q9BZ72 1349 aa9.18□□□□□ -0.94
VAMP3-201ENST00000054666 A0A1W2PQJ5 194 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 EFCAB8A8MWE9 144 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 E9PMD0 336 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 NDUFA10O95299 355 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 STAT3P40763 770 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 JAG1P78504 1218 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 ZBED6P86452 979 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 PPP2R3AQ06190 1150 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 EHHADHQ08426 723 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 RRP1BQ14684 758 aaKnown RBP9.17□□□□□ -0.94
VAMP3-201ENST00000054666 VWA3BQ502W6 1294 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 FIGNQ5HY92 759 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 ZNF569Q5MCW4 686 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 FAM160B2Q86V87 743 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 DNAJC19Q96DA6 116 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 UIMC1Q96RL1 719 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 FEZ1Q99689 392 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 SLF1Q9BQI6 1058 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 ZBTB12Q9Y330 459 aaPredicted RBP9.17□□□□□ -0.94
VAMP3-201ENST00000054666 EPN1Q9Y6I3 576 aaPredicted RBP9.17□□□□□ -0.94
VAMP3-201ENST00000054666 CNTNAP1P78357 1384 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 CTAGE9A4FU28 777 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 POTEFA5A3E0 1075 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 FANCGO15287 622 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 TBC1D12O60347 775 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 TADA3O75528 432 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 POTEIP0CG38 1075 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 HOXA13P31271 388 aaPredicted RBP9.17□□□□□ -0.94
VAMP3-201ENST00000054666 CIITAP33076 1130 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 KRT83P78385 493 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 MAP3K9P80192 1104 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 FKBP3Q00688 224 aaKnown RBP9.17□□□□□ -0.94
VAMP3-201ENST00000054666 TUBB2AQ13885 445 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 ERCC6LQ2NKX8 1250 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 CCDC40Q4G0X9 1142 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 MIIPQ5JXC2 388 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 CCDC174Q6PII3 467 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 CCDC84Q86UT8 332 aaPredicted RBP9.17□□□□□ -0.94
VAMP3-201ENST00000054666 MTMR14Q8NCE2 650 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 ACER1Q8TDN7 264 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 TUBB2BQ9BVA1 445 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 TANGO6Q9C0B7 1094 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 TTYH3Q9C0H2 523 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 NDST4Q9H3R1 872 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 ZHX3Q9H4I2 956 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 VCPKMTQ9H867 229 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 DNM3Q9UQ16 869 aa9.17□□□□□ -0.94
VAMP3-201ENST00000054666 KIF13BQ9NQT8 1826 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 GCOM1H8Y6P7 765 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 RNF225M0QZC1 329 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 MED24O75448 989 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 GNA14O95837 355 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 CFBP00751 764 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 ASNSP08243 561 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 CYP3A4P08684 503 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 POLR2MP0CAP2 368 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 CYP11B2P19099 503 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 RPA1P27694 616 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 LRRC41Q15345 812 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 MEA1Q16626 185 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 KIF4BQ2VIQ3 1234 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 HERC4Q5GLZ8 1057 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 POTEAQ6S8J7 498 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 PPP4R3CPQ6ZMV5 832 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 LRRC55Q6ZSA7 311 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 KIAA1328Q86T90 577 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 CEP63Q96MT8 703 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 TMEM39BQ9GZU3 492 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 RANBP17Q9H2T7 1088 aaKnown RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 MRPL11Q9Y3B7 192 aaKnown RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 COL4A3BPQ9Y5P4 624 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 COL4A5P29400 1685 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 FAM86B1E9PN63 330 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 TRAF5O00463 557 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 FAM86B2P0C5J1 330 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 TAL1P17542 331 aaPredicted RBP9.16□□□□□ -0.94
VAMP3-201ENST00000054666 SPIRE1Q08AE8 756 aa9.16□□□□□ -0.94
VAMP3-201ENST00000054666 ZYXQ15942 572 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms