RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 STK3Q13188 491 aa19.92■□□□□ 0.78
PHGDH-227ENST00000641811 NTRK3Q16288 839 aa19.92■□□□□ 0.78
PHGDH-227ENST00000641811 GLT1D1Q96MS3 346 aa19.92■□□□□ 0.78
PHGDH-227ENST00000641811 FRMPD4Q14CM0 1322 aa19.92■□□□□ 0.78
PHGDH-227ENST00000641811 NKRFO15226 690 aaKnown RBP eCLIP19.91■□□□□ 0.78
PHGDH-227ENST00000641811 EIF5BO60841 1220 aaKnown RBP19.91■□□□□ 0.78
PHGDH-227ENST00000641811 MRPS9P82933 396 aaKnown RBP19.91■□□□□ 0.78
PHGDH-227ENST00000641811 TLE2Q04725 743 aa19.91■□□□□ 0.78
PHGDH-227ENST00000641811 IL17RAQ96F46 866 aa19.91■□□□□ 0.78
PHGDH-227ENST00000641811 ZNF274Q96GC6 653 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-227ENST00000641811 BARHL2Q9NY43 387 aa19.91■□□□□ 0.78
PHGDH-227ENST00000641811 MRVI1Q9Y6F6 885 aa19.91■□□□□ 0.78
PHGDH-227ENST00000641811 PRPF3O43395 683 aaKnown RBP19.9■□□□□ 0.78
PHGDH-227ENST00000641811 SCG2P13521 617 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 IFNAR1P17181 557 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 PKN1Q16512 942 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 PFKFB3Q16875 520 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-227ENST00000641811 C1orf53Q5VUE5 145 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 CHRDL2Q6WN34 429 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 SLC26A6Q9BXS9 759 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 RTEL1Q9NZ71 1219 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 DDX41Q9UJV9 622 aaKnown RBP19.9■□□□□ 0.78
PHGDH-227ENST00000641811 COLQQ9Y215 455 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-227ENST00000641811 ELP1O95163 1332 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 KIAA1217Q5T5P2 1943 aa19.9■□□□□ 0.78
PHGDH-227ENST00000641811 SMCO2A6NFE2 343 aa19.89■□□□□ 0.77
PHGDH-227ENST00000641811 ZEB2O60315 1214 aa19.89■□□□□ 0.77
PHGDH-227ENST00000641811 SORBS3O60504 671 aa19.89■□□□□ 0.77
PHGDH-227ENST00000641811 PQBP1O60828 265 aaKnown RBP19.89■□□□□ 0.77
PHGDH-227ENST00000641811 MYL3P08590 195 aa19.89■□□□□ 0.77
PHGDH-227ENST00000641811 AK2P54819 239 aa19.89■□□□□ 0.77
PHGDH-227ENST00000641811 ARHGAP1Q07960 439 aa19.89■□□□□ 0.77
PHGDH-227ENST00000641811 RIC8AQ9NPQ8 531 aa19.89■□□□□ 0.77
PHGDH-227ENST00000641811 TPCN1Q9ULQ1 816 aa19.89■□□□□ 0.77
PHGDH-227ENST00000641811 hCG_1984214I3L0E3 225 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 ADAMTS3O15072 1205 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 GH1P01241 217 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 CPT1AP50416 773 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 ADCY7P51828 1080 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 PSMC6P62333 389 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 SP2Q02086 613 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 PPP1R18Q6NYC8 613 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 SH3RF1Q7Z6J0 888 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 ZNF713Q8N859 430 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-227ENST00000641811 AFG1LQ8WV93 481 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 PGBD1Q96JS3 809 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 ALDH8A1Q9H2A2 487 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-227ENST00000641811 PRDM5Q9NQX1 630 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-227ENST00000641811 PCDHA6Q9UN73 950 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 PCDHA8Q9Y5H6 950 aa19.88■□□□□ 0.77
PHGDH-227ENST00000641811 GRIN2DO15399 1336 aa19.87■□□□□ 0.77
PHGDH-227ENST00000641811 A0A0U1RQG5 324 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-227ENST00000641811 A6NJR5 290 aa19.87■□□□□ 0.77
PHGDH-227ENST00000641811 DTNBO60941 627 aa19.87■□□□□ 0.77
PHGDH-227ENST00000641811 CDK7P50613 346 aa19.87■□□□□ 0.77
PHGDH-227ENST00000641811 AKAP17AQ02040 695 aaKnown RBP19.87■□□□□ 0.77
PHGDH-227ENST00000641811 PCNX4Q63HM2 1172 aa19.87■□□□□ 0.77
PHGDH-227ENST00000641811 INPP4AQ96PE3 977 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-227ENST00000641811 RNF26Q9BY78 433 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-227ENST00000641811 BCAS3Q9H6U6 928 aa19.87■□□□□ 0.77
PHGDH-227ENST00000641811 PDLIM7Q9NR12 457 aa19.87■□□□□ 0.77
PHGDH-227ENST00000641811 TMEM260Q9NX78 707 aa19.87■□□□□ 0.77
PHGDH-227ENST00000641811 TRIM43BA6NCK2 446 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 SPDYE3A6NKU9 549 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 ARVCFO00192 962 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 CPLX1O14810 134 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 CABYRO75952 493 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 MAGEA10P43363 369 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-227ENST00000641811 NEK4P51957 841 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 PURAQ00577 322 aaKnown RBP19.86■□□□□ 0.77
PHGDH-227ENST00000641811 SEMA3FQ13275 785 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 ANKRD33Q7Z3H0 272 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 DHX37Q8IY37 1157 aaKnown RBP19.86■□□□□ 0.77
PHGDH-227ENST00000641811 PPP1R13LQ8WUF5 828 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 TRIM43Q96BQ3 446 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-227ENST00000641811 POLR3EQ9NVU0 708 aa19.86■□□□□ 0.77
PHGDH-227ENST00000641811 GGPS1O95749 300 aa19.85■□□□□ 0.77
PHGDH-227ENST00000641811 UBA1P22314 1058 aaKnown RBP19.85■□□□□ 0.77
PHGDH-227ENST00000641811 MDM2Q00987 491 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-227ENST00000641811 SSRP1Q08945 709 aaKnown RBP19.85■□□□□ 0.77
PHGDH-227ENST00000641811 FAAP100Q0VG06 881 aa19.85■□□□□ 0.77
PHGDH-227ENST00000641811 SCRN1Q12765 414 aa19.85■□□□□ 0.77
PHGDH-227ENST00000641811 ITGA7Q13683 1181 aa19.85■□□□□ 0.77
PHGDH-227ENST00000641811 BRDTQ58F21 947 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-227ENST00000641811 SLC43A3Q8NBI5 491 aa19.85■□□□□ 0.77
PHGDH-227ENST00000641811 GDF15Q99988 308 aa19.85■□□□□ 0.77
PHGDH-227ENST00000641811 PRO3102Q9H379 93 aa19.85■□□□□ 0.77
PHGDH-227ENST00000641811 RBM27Q9P2N5 1060 aaKnown RBP19.85■□□□□ 0.77
PHGDH-227ENST00000641811 PRKAG2Q9UGJ0 569 aa19.85■□□□□ 0.77
PHGDH-227ENST00000641811 DCDC2CA8MYV0 355 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 SPATA31C2B4DYI2 1134 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 PFKFB2O60825 505 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 STAM2O75886 525 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 MMP3P08254 477 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 CLTBP09497 229 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 ANKRD1Q15327 319 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 CELF3Q5SZQ8 465 aaKnown RBP19.84■□□□□ 0.77
PHGDH-227ENST00000641811 MYSM1Q5VVJ2 828 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 JAKMIP3Q5VZ66 844 aa19.84■□□□□ 0.77
PHGDH-227ENST00000641811 XRRA1Q6P2D8 792 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms