RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 WDR90Q96KV7 1748 aa24.39■■□□□ 1.49
SCARB2-212ENST00000638663 IGLV3-22A0A075B6J6 115 aa24.39■■□□□ 1.49
SCARB2-212ENST00000638663 MSH4O15457 936 aa24.39■■□□□ 1.49
SCARB2-212ENST00000638663 RPN1P04843 607 aaKnown RBP24.39■■□□□ 1.49
SCARB2-212ENST00000638663 STAT3P40763 770 aa24.39■■□□□ 1.49
SCARB2-212ENST00000638663 MYL5Q02045 173 aa24.39■■□□□ 1.49
SCARB2-212ENST00000638663 ANKRD13AQ8IZ07 590 aa24.39■■□□□ 1.49
SCARB2-212ENST00000638663 ADAMTS5Q9UNA0 930 aa24.39■■□□□ 1.49
SCARB2-212ENST00000638663 PTMAP06454 111 aaKnown RBP24.38■■□□□ 1.49
SCARB2-212ENST00000638663 ZNF75DP51815 510 aa24.38■■□□□ 1.49
SCARB2-212ENST00000638663 SARM1Q6SZW1 724 aa24.38■■□□□ 1.49
SCARB2-212ENST00000638663 PNMA8AQ86V59 439 aaPredicted RBP24.38■■□□□ 1.49
SCARB2-212ENST00000638663 OTUD5Q96G74 571 aa24.38■■□□□ 1.49
SCARB2-212ENST00000638663 ZFP91Q96JP5 570 aaPredicted RBP24.38■■□□□ 1.49
SCARB2-212ENST00000638663 FAM20AQ96MK3 541 aa24.38■■□□□ 1.49
SCARB2-212ENST00000638663 RIPK3Q9Y572 518 aa24.38■■□□□ 1.49
SCARB2-212ENST00000638663 TPM4P67936 248 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 GHRHRQ02643 423 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 DHX8Q14562 1220 aaKnown RBP24.37■■□□□ 1.49
SCARB2-212ENST00000638663 PLA2G4DQ86XP0 818 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 SMYD4Q8IYR2 804 aaPredicted RBP24.37■■□□□ 1.49
SCARB2-212ENST00000638663 BLOC1S4Q9NUP1 217 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 CLEC11AQ9Y240 323 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 MYL1P05976 194 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 CCT6AP40227 531 aaKnown RBP24.37■■□□□ 1.49
SCARB2-212ENST00000638663 FMR1Q06787 632 aaKnown RBP eCLIP24.37■■□□□ 1.49
SCARB2-212ENST00000638663 ECM1Q16610 540 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 TMEM119Q4V9L6 283 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 TREML2Q5T2D2 321 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 SNRNP48Q6IEG0 339 aaKnown RBP24.37■■□□□ 1.49
SCARB2-212ENST00000638663 SYTL5Q8TDW5 730 aaPredicted RBP24.37■■□□□ 1.49
SCARB2-212ENST00000638663 RNF146Q9NTX7 359 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 RMND1Q9NWS8 449 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 STK17AQ9UEE5 414 aa24.37■■□□□ 1.49
SCARB2-212ENST00000638663 IRF6O14896 467 aa24.36■■□□□ 1.49
SCARB2-212ENST00000638663 PPATQ06203 517 aa24.36■■□□□ 1.49
SCARB2-212ENST00000638663 SPIRE1Q08AE8 756 aa24.36■■□□□ 1.49
SCARB2-212ENST00000638663 TMEM132BQ14DG7 1078 aa24.36■■□□□ 1.49
SCARB2-212ENST00000638663 ERO1BQ86YB8 467 aa24.36■■□□□ 1.49
SCARB2-212ENST00000638663 HOXC10Q9NYD6 342 aa24.36■■□□□ 1.49
SCARB2-212ENST00000638663 ZNF214Q9UL59 606 aaPredicted RBP24.36■■□□□ 1.49
SCARB2-212ENST00000638663 COL11A1P12107 1806 aaPredicted RBP24.36■■□□□ 1.49
SCARB2-212ENST00000638663 SPDYE16A6NNV3 312 aaPredicted RBP24.35■■□□□ 1.49
SCARB2-212ENST00000638663 POTEIP0CG38 1075 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 POTEJP0CG39 1038 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 CD44P16070 742 aaKnown RBP24.35■■□□□ 1.49
SCARB2-212ENST00000638663 OAZ1P54368 228 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 RPS6P62753 249 aaKnown RBP24.35■■□□□ 1.49
SCARB2-212ENST00000638663 MCM6Q14566 821 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 CEP55Q53EZ4 464 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 NCAPH2Q6IBW4 605 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 NSMFQ6X4W1 530 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 SLC30A10Q6XR72 485 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 RPTORQ8N122 1335 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 GADL1Q6ZQY3 521 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 SV2BQ7L1I2 683 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 KCNK18Q7Z418 384 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 TRMT44Q8IYL2 757 aaKnown RBP24.35■■□□□ 1.49
SCARB2-212ENST00000638663 LARP4BQ92615 738 aaKnown RBP24.35■■□□□ 1.49
SCARB2-212ENST00000638663 RAD54LQ92698 747 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 TRIM9Q9C026 710 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 HSD3B7Q9H2F3 369 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 MAP3K20Q9NYL2 800 aaKnown RBP24.35■■□□□ 1.49
SCARB2-212ENST00000638663 PTPRFP10586 1907 aa24.35■■□□□ 1.49
SCARB2-212ENST00000638663 KLRC4O43908 158 aa24.34■■□□□ 1.49
SCARB2-212ENST00000638663 AMPD3Q01432 767 aa24.34■■□□□ 1.49
SCARB2-212ENST00000638663 KLHL10Q6JEL2 608 aa24.34■■□□□ 1.49
SCARB2-212ENST00000638663 RNF207Q6ZRF8 634 aa24.34■■□□□ 1.49
SCARB2-212ENST00000638663 SAMD3Q8N6K7 520 aa24.34■■□□□ 1.49
SCARB2-212ENST00000638663 SPC24Q8NBT2 197 aa24.34■■□□□ 1.49
SCARB2-212ENST00000638663 IL31RAQ8NI17 732 aa24.34■■□□□ 1.49
SCARB2-212ENST00000638663 KDM3AQ9Y4C1 1321 aa24.34■■□□□ 1.49
SCARB2-212ENST00000638663 SPDYE5A6NIY4 337 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 ERCC5P28715 1186 aaPredicted RBP24.33■■□□□ 1.49
SCARB2-212ENST00000638663 KMT5BQ4FZB7 885 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 ARMC9Q7Z3E5 817 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 TAAR1Q96RJ0 339 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 C7orf25Q9BPX7 421 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 VAV3Q9UKW4 847 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 RABGAP1Q9Y3P9 1069 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 MYPNQ86TC9 1320 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 PPP1R3GB7ZBB8 358 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 PLS1Q14651 629 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 HYIQ5T013 277 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 ZNF658Q5TYW1 1059 aaPredicted RBP24.33■■□□□ 1.49
SCARB2-212ENST00000638663 ENOX1Q8TC92 643 aaKnown RBP24.33■■□□□ 1.49
SCARB2-212ENST00000638663 MED15Q96RN5 788 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 FANCLQ9NW38 375 aa24.33■■□□□ 1.49
SCARB2-212ENST00000638663 RBBP6Q7Z6E9 1792 aaKnown RBP24.33■■□□□ 1.48
SCARB2-212ENST00000638663 A0A0G2JLL6 359 aaPredicted RBP24.32■■□□□ 1.48
SCARB2-212ENST00000638663 POTEB3A0JP26 581 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 MEIS1O00470 390 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 ATP2A1O14983 1001 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 MED24O75448 989 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 ASIC1P78348 528 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 KCNB1Q14721 858 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 HS1BP3Q53T59 392 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 MAP1SQ66K74 1059 aaPredicted RBP24.32■■□□□ 1.48
SCARB2-212ENST00000638663 POTEBQ6S5H4 581 aa24.32■■□□□ 1.48
SCARB2-212ENST00000638663 PRRT2Q7Z6L0 340 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms