RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 WHAMMQ8TF30 809 aa17.35■□□□□ 0.37
CLN5-218ENST00000637397 A0A1B0GTH6 734 aa17.35■□□□□ 0.37
CLN5-218ENST00000637397 PP2D1A8MPX8 630 aa17.35■□□□□ 0.37
CLN5-218ENST00000637397 AFPP02771 609 aaKnown RBP17.35■□□□□ 0.37
CLN5-218ENST00000637397 RPSAP08865 295 aaKnown RBP17.35■□□□□ 0.37
CLN5-218ENST00000637397 MECOMQ03112 1051 aa17.35■□□□□ 0.37
CLN5-218ENST00000637397 CLIC2O15247 247 aa17.35■□□□□ 0.37
CLN5-218ENST00000637397 THAP12O43422 761 aa17.35■□□□□ 0.37
CLN5-218ENST00000637397 FXR1P51114 621 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLN5-218ENST00000637397 VPS52Q8N1B4 723 aa17.35■□□□□ 0.37
CLN5-218ENST00000637397 EMILIN3Q9NT22 766 aa17.35■□□□□ 0.37
CLN5-218ENST00000637397 FAM205CA6NFA0 338 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 DIXDC1Q155Q3 683 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 MSANTD4Q8NCY6 345 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 ESYT3A0FGR9 886 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 ALX1Q15699 326 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 RAD9BQ6WBX8 426 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 CCDC127Q96BQ5 260 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 CPVLQ9H3G5 476 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 HIP1RO75146 1068 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 CYP2D6P10635 497 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 FERP16591 822 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 FAM98CQ17RN3 349 aaKnown RBP17.34■□□□□ 0.37
CLN5-218ENST00000637397 NFRKBQ6P4R8 1299 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 MAIP1Q8WWC4 291 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 FRMD3A2A2Y4 597 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 SLC16A2P36021 539 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 ANTXR2P58335 489 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 LRRC63Q05C16 580 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 PFKFB3Q16875 520 aaPredicted RBP17.34■□□□□ 0.37
CLN5-218ENST00000637397 ANKRD20A3Q5VUR7 823 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 CCDC13Q8IYE1 715 aa17.34■□□□□ 0.37
CLN5-218ENST00000637397 ERVV-1B6SEH8 477 aa17.33■□□□□ 0.37
CLN5-218ENST00000637397 GFPT2O94808 682 aa17.33■□□□□ 0.37
CLN5-218ENST00000637397 SLCO1A2P46721 670 aa17.33■□□□□ 0.37
CLN5-218ENST00000637397 SCNN1DP51172 638 aa17.33■□□□□ 0.37
CLN5-218ENST00000637397 ERFEQ4G0M1 354 aa17.33■□□□□ 0.37
CLN5-218ENST00000637397 COG1Q8WTW3 980 aa17.33■□□□□ 0.37
CLN5-218ENST00000637397 KCNB2Q92953 911 aa17.33■□□□□ 0.37
CLN5-218ENST00000637397 RABGAP1Q9Y3P9 1069 aa17.33■□□□□ 0.37
CLN5-218ENST00000637397 LRRC53A6NM62 1247 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 LRRN2O75325 713 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 CIB2O75838 187 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 ALKBH5Q6P6C2 394 aaKnown RBP17.33■□□□□ 0.36
CLN5-218ENST00000637397 RNF10Q8N5U6 811 aaKnown RBP17.33■□□□□ 0.36
CLN5-218ENST00000637397 SH2D4AQ9H788 454 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 TMEM94Q12767 1356 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 LMTK2Q8IWU2 1503 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 MEIS1O00470 390 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 PALMO75781 387 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 CCDC62Q6P9F0 684 aa17.33■□□□□ 0.36
CLN5-218ENST00000637397 RBM43Q6ZSC3 357 aaKnown RBP17.33■□□□□ 0.36
CLN5-218ENST00000637397 LMNB1P20700 586 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 ADCY1Q08828 1119 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 ICE2Q659A1 982 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 PPP1R21Q6ZMI0 780 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 BRIP1Q9BX63 1249 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 L2HGDHQ9H9P8 463 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 PXDNLA1KZ92 1463 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 NCK2O43639 380 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 NR1I3Q14994 352 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 CCDC38Q502W7 563 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 ODR4Q5SWX8 454 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 TRIM68Q6AZZ1 485 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 KRT26Q7Z3Y9 468 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 FBXO11Q86XK2 927 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 KIFC2Q96AC6 838 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 PBKQ96KB5 322 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 K7ENM7 598 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 TRIM66O15016 1216 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 TNNI1P19237 187 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 ZKSCAN8Q15776 578 aaPredicted RBP17.32■□□□□ 0.36
CLN5-218ENST00000637397 LARSQ9P2J5 1176 aaKnown RBP17.32■□□□□ 0.36
CLN5-218ENST00000637397 GFPT1Q06210 699 aaPredicted RBP17.32■□□□□ 0.36
CLN5-218ENST00000637397 IGDCC4Q8TDY8 1250 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 ADD3Q9UEY8 706 aaKnown RBP17.32■□□□□ 0.36
CLN5-218ENST00000637397 PLAAQ9Y263 795 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 PASKQ96RG2 1323 aa17.32■□□□□ 0.36
CLN5-218ENST00000637397 MMS22LQ6ZRQ5 1243 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 KCTD1Q719H9 257 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 FAM186BQ8IYM0 893 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 OSBPL9Q96SU4 736 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 ISCA1Q9BUE6 129 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 HMGB1P1B2RPK0 211 aaPredicted RBP17.31■□□□□ 0.36
CLN5-218ENST00000637397 SLFN13Q68D06 897 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
CLN5-218ENST00000637397 RASSF2P50749 326 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 STRN3Q13033 797 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 UBE2SQ16763 222 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 CFAP157Q5JU67 520 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 NSMFQ6X4W1 530 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 TEKT1Q969V4 418 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 MMS19Q96T76 1030 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 GCNT4Q9P109 453 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 OVOS2A0A0J9YW53 1432 aa17.31■□□□□ 0.36
CLN5-218ENST00000637397 OVOS2Q6IE36 1432 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms