RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 PLS3P13797 630 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 IFT88Q13099 833 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 SRPK1Q96SB4 655 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 SOX11P35716 441 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 CACNB2Q08289 660 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 C2orf54Q08AI8 447 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 EDC3Q96F86 508 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 ZNF668Q96K58 619 aaPredicted RBP18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 TRIM55Q9BYV6 548 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 MAST3O60307 1309 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 KRT14P02533 472 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 KDELC2Q7Z4H8 507 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 hCG_2014768A0A024R1R8 64 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 ZNF75DP51815 510 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 FASTKD5Q7L8L6 764 aaKnown RBP18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 CLIC6Q96NY7 704 aa18.87■□□□□ 0.61
CACNA1A-215ENST00000635727 TJAP1Q5JTD0 557 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 USP21Q9UK80 565 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 MAPK4P31152 587 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 FAM160B1Q5W0V3 765 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 ANKRD44Q8N8A2 993 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 OTUD7AQ8TE49 926 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 CAPS2Q9BXY5 557 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 TMEM232C9JQI7 657 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 NSFP46459 744 aaKnown RBP18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 ANGPT1Q15389 498 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 NUDCD1Q96RS6 583 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 NPHP3Q7Z494 1330 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 GOLGA8MH3BSY2 632 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 LRRC41Q15345 812 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 TBC1D12O60347 775 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 KRT1P04264 644 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 FAM49AQ9H0Q0 323 aaPredicted RBP18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 LRRC4Q9HBW1 653 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 SLC16A2P36021 539 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 CEP70Q8NHQ1 597 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 SH3KBP1Q96B97 665 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 MRFAP1Q9Y605 127 aa18.86■□□□□ 0.61
CACNA1A-215ENST00000635727 CDK13Q14004 1512 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 DSTYKQ6XUX3 929 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 G2E3Q7L622 706 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 TYW1Q9NV66 732 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 TMEM247A6NEH6 219 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 WDR64B1ANS9 1081 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 PPP1R2P41236 205 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 MSH2P43246 934 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 SKOR1P84550 965 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 C10orf76Q5T2E6 689 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 MTERF2Q49AM1 385 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 MAGOHBQ96A72 148 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 CASKIN1Q8WXD9 1431 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 ADAM9Q13443 819 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 TMTC1Q8IUR5 882 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 SCN4BQ8IWT1 228 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 OR6B2Q6IFH4 312 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 CHURC1Q8WUH1 139 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 TMEM87BQ96K49 555 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 SERPINI2O75830 405 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 DDIT3P35638 169 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 CCT5P48643 541 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 SNCBQ16143 134 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 KIAA1024Q9UPX6 916 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 ATP8A1Q9Y2Q0 1164 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 PCDH11XQ9BZA7 1347 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 PCDH11YQ9BZA8 1340 aa18.85■□□□□ 0.61
CACNA1A-215ENST00000635727 NFX1Q12986 1120 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 GDF11O95390 407 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 MRPS25P82663 173 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 ATG16L1Q676U5 607 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 MCF2LO15068 1137 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 LVRNQ6Q4G3 990 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 VMP1Q96GC9 406 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 GSDMAQ96QA5 445 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 ZNF577Q9BSK1 485 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 ESRRGP62508 458 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 PGBD3Q8N328 593 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 XPO4Q9C0E2 1151 aaKnown RBP18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 KDM3AQ9Y4C1 1321 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 HSP90AA5PQ58FG0 334 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 LRRD1A4D1F6 860 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 AGRPO00253 132 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 FAM182BQ5T319 152 aa18.84■□□□□ 0.61
CACNA1A-215ENST00000635727 TTC41PQ6P2S7 1318 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 GOLGA8IPA6NC78 632 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 GOLGA8JA6NMD2 632 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 VCAM1P19320 739 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 SMYD4Q8IYR2 804 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 AGR3Q8TD06 166 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 TRPV6Q9H1D0 765 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 ATF5Q9Y2D1 282 aaPredicted RBP18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 USP17L12C9JPN9 530 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 USP17L21D6R901 530 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 SEC24BO95487 1268 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 CCDC159P0C7I6 412 aa18.83■□□□□ 0.61
CACNA1A-215ENST00000635727 SLC7A5Q01650 507 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms