RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 TRIT1Q9H3H1 467 aaKnown RBP9.62□□□□□ -0.87
SMARCA2-239ENST00000635388 GPATCH2Q9NW75 528 aa9.62□□□□□ -0.87
SMARCA2-239ENST00000635388 SNX11Q9Y5W9 270 aa9.62□□□□□ -0.87
SMARCA2-239ENST00000635388 ANKARQ7Z5J8 1434 aa9.62□□□□□ -0.87
SMARCA2-239ENST00000635388 TOPAZ1Q8N9V7 1692 aa9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 NOP56O00567 594 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 KCNH1O95259 989 aa9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 GSNP06396 782 aa9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 FGFR1P11362 822 aa9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 PLEKHG4Q58EX7 1191 aa9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 POMZP3Q6PJE2 187 aa9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 SEMA6BQ9H3T3 888 aa9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 SF3B6Q9Y3B4 125 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 TRPM3Q9HCF6 1732 aaPredicted RBP9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 EIF3AQ14152 1382 aaKnown RBP9.61□□□□□ -0.87
SMARCA2-239ENST00000635388 TMEM265A0A087WTH1 108 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 TRAV20A0A0B4J274 112 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 VAMP4O75379 141 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 CDC45O75419 566 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 TPP2P29144 1249 aaPredicted RBP9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 BMP8BP34820 402 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 CLEC16AQ2KHT3 1053 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 APPBP2Q92624 585 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 OSBP2Q969R2 916 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 NKX2-4Q9H2Z4 354 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 ZSWIM5Q9P217 1185 aa9.6□□□□□ -0.87
SMARCA2-239ENST00000635388 ALS2Q96Q42 1657 aa9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 SF1Q15637 639 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 ZC3H12BQ5HYM0 836 aaKnown RBP9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 KIAA0907Q7Z7F0 614 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 HOMER1Q86YM7 354 aa9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 WFDC3Q8IUB2 231 aa9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 USHBP1Q8N6Y0 703 aa9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 UBE2FQ969M7 185 aa9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 GPR55Q9Y2T6 319 aaPredicted RBP9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 ATP7BP35670 1465 aa9.59□□□□□ -0.87
SMARCA2-239ENST00000635388 TNS3Q68CZ2 1445 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 ZNF205O95201 554 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 ESR1P03372 595 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 SCG5P05408 212 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 GFRA1P56159 465 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 AMPD2Q01433 879 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 TKFCQ3LXA3 575 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 FAM209AQ5JX71 171 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 ZNF662Q6ZS27 426 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 C1orf159Q96HA4 380 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 SIN3AQ96ST3 1273 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 ATP13A1Q9HD20 1204 aa9.58□□□□□ -0.88
SMARCA2-239ENST00000635388 AFF2P51816 1311 aa9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 DLX3O60479 287 aa9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 PABPC1P11940 636 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 L1CAMP32004 1257 aa9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 ZNF772Q68DY9 489 aaPredicted RBP9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 C16orf86Q6ZW13 317 aa9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 LINC00116Q8NCU8 138 aa9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 IER2Q9BTL4 223 aa9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 SLC12A9Q9BXP2 914 aa9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 MRPS23Q9Y3D9 190 aaKnown RBP9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 PLCH1Q4KWH8 1693 aa9.57□□□□□ -0.88
SMARCA2-239ENST00000635388 CRYBG1Q9Y4K1 1723 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 TRBV23-1A0A0A0MS06 115 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 AURKAO14965 403 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 PRODHO43272 600 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 CD3EP07766 207 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 IFNGR1P15260 489 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 VAV1P15498 845 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 CANXP27824 592 aaKnown RBP9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 POU4F1Q01851 419 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 DPY19L1Q2PZI1 675 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 RTP2Q5QGT7 225 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 TMPRSS7Q7RTY8 843 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 COPS5Q92905 334 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 HRASLS5Q96KN8 279 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 FCRL3Q96P31 734 aaPredicted RBP9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 DHRS4Q9BTZ2 278 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 FOXP3Q9BZS1 431 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 CYP26B1Q9NR63 512 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 DUSP13Q9UII6 198 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 PCDHA11Q9Y5I1 949 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
SMARCA2-239ENST00000635388 ROCK2O75116 1388 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 STXBP3O00186 592 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 HOXC12P31275 282 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 PRKCQQ04759 706 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 MAP4K2Q12851 820 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 CWF19L1Q69YN2 538 aaKnown RBP9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 NSMFQ6X4W1 530 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 SCUBE1Q8IWY4 988 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 KREMEN2Q8NCW0 462 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 RNF112Q9ULX5 631 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 ZNF281Q9Y2X9 895 aa9.55□□□□□ -0.88
SMARCA2-239ENST00000635388 NWD2Q9ULI1 1742 aa9.54□□□□□ -0.88
SMARCA2-239ENST00000635388 SBNO1A3KN83 1393 aa9.54□□□□□ -0.88
SMARCA2-239ENST00000635388 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
SMARCA2-239ENST00000635388 CCDC163A0A0D9SF12 145 aa9.54□□□□□ -0.88
SMARCA2-239ENST00000635388 PPP1R12AO14974 1030 aaPredicted RBP9.54□□□□□ -0.88
SMARCA2-239ENST00000635388 MED26O95402 600 aa9.54□□□□□ -0.88
SMARCA2-239ENST00000635388 ASMTLO95671 621 aa9.54□□□□□ -0.88
SMARCA2-239ENST00000635388 SYPP08247 313 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms