RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 SLC12A9Q9BXP2 914 aa7.55□□□□□ -1.2
LINC00254-202ENST00000633813 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
LINC00254-202ENST00000633813 GPR160Q9UJ42 338 aa7.55□□□□□ -1.2
LINC00254-202ENST00000633813 PTPRUQ92729 1446 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 NOP56O00567 594 aaKnown RBP7.54□□□□□ -1.2
LINC00254-202ENST00000633813 USP2O75604 605 aaPredicted RBP7.54□□□□□ -1.2
LINC00254-202ENST00000633813 CD3EP07766 207 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 GRB10Q13322 594 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 CYP2R1Q6VVX0 501 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 ZPBP2Q6X784 338 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 ARHGEF39Q8N4T4 335 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 HHIPL1Q96JK4 782 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 C19orf44Q9H6X5 657 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 PANK3Q9H999 370 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 ERVK13-1Q9NX77 482 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 PPP1R1BQ9UD71 204 aaPredicted RBP7.54□□□□□ -1.2
LINC00254-202ENST00000633813 CGGBP1Q9UFW8 167 aaPredicted RBP7.54□□□□□ -1.2
LINC00254-202ENST00000633813 EBF1Q9UH73 591 aa7.54□□□□□ -1.2
LINC00254-202ENST00000633813 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.54□□□□□ -1.2
LINC00254-202ENST00000633813 ARHGEF28Q8N1W1 1705 aaKnown RBP7.54□□□□□ -1.2
LINC00254-202ENST00000633813 NRDCO43847 1150 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 KCNA6P17658 529 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 TRHRP34981 398 aaPredicted RBP7.53□□□□□ -1.2
LINC00254-202ENST00000633813 RTP1P59025 263 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 AMPD2Q01433 879 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 RTP2Q5QGT7 225 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 CKAP2LQ8IYA6 745 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 BVESQ8NE79 360 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 HNRNPLLQ8WVV9 542 aaKnown RBP7.53□□□□□ -1.2
LINC00254-202ENST00000633813 PPP1R14AQ96A00 147 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 CDK19Q9BWU1 502 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 SP110Q9HB58 689 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 SUSD2Q9UGT4 822 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 AKT3Q9Y243 479 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 PLEKHH1Q9ULM0 1364 aa7.53□□□□□ -1.2
LINC00254-202ENST00000633813 PTCH1Q13635 1447 aa7.52□□□□□ -1.2
LINC00254-202ENST00000633813 CPS1P31327 1500 aa7.52□□□□□ -1.2
LINC00254-202ENST00000633813 QRICH2Q9H0J4 1663 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 A0A1W2PQ45 241 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-202ENST00000633813 A0A1W2PQY0 241 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 ZNF503-AS2A6NEH8 195 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 LRRC10BA6NIK2 292 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 WTIPA6NIX2 430 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-202ENST00000633813 CCER2I3L3R5 266 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 HSPA2P54652 639 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 HLA-DQA1Q5Y7H0 255 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 GALNT18Q6P9A2 607 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 EEPD1Q7L9B9 569 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 FCRL3Q96P31 734 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-202ENST00000633813 TRIM55Q9BYV6 548 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 RNF32Q9H0A6 362 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 SLC12A5Q9H2X9 1139 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 PRKRIP1Q9H875 184 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-202ENST00000633813 GPR55Q9Y2T6 319 aaPredicted RBP7.52□□□□□ -1.21
LINC00254-202ENST00000633813 TAF6LQ9Y6J9 622 aa7.52□□□□□ -1.21
LINC00254-202ENST00000633813 LMTK3Q96Q04 1460 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 NINLQ9Y2I6 1382 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 FADS2P1A8MWK0 482 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 B2RBV5 119 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 FGF10O15520 208 aaPredicted RBP7.51□□□□□ -1.21
LINC00254-202ENST00000633813 TBC1D8O95759 1140 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 SF3A1Q15459 793 aaKnown RBP7.51□□□□□ -1.21
LINC00254-202ENST00000633813 SV2CQ496J9 727 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 EEF1DP3Q658K8 133 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 LIN37Q96GY3 246 aaPredicted RBP7.51□□□□□ -1.21
LINC00254-202ENST00000633813 EPN3Q9H201 632 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 LRP2BPQ9P2M1 347 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 APEX2Q9UBZ4 518 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 KNSTRNQ9Y448 316 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 TULP4Q9NRJ4 1543 aa7.51□□□□□ -1.21
LINC00254-202ENST00000633813 KNDC1Q76NI1 1749 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 KTN1Q86UP2 1357 aaKnown RBP7.5□□□□□ -1.21
LINC00254-202ENST00000633813 AGRPO00253 132 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 AURKAO14965 403 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 U2SURPO15042 1029 aaKnown RBP7.5□□□□□ -1.21
LINC00254-202ENST00000633813 KLF4O43474 513 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 SUSD5O60279 629 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 PSPNO60542 156 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 VAMP4O75379 141 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 GJB6O95452 261 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 IFNGR1P15260 489 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 SEPHS1P49903 392 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 RALBP1Q15311 655 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 MLANAQ16655 118 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 DDR2Q16832 855 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 DPY19L1Q2PZI1 675 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 TIGD5Q53EQ6 642 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 RCSD1Q6JBY9 416 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 JAMLQ86YT9 394 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 KSR1Q8IVT5 923 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 ARMC5Q96C12 935 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 YBX2Q9Y2T7 364 aaKnown RBP7.5□□□□□ -1.21
LINC00254-202ENST00000633813 EMC9Q9Y3B6 208 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 BACE2Q9Y5Z0 518 aa7.5□□□□□ -1.21
LINC00254-202ENST00000633813 NPC1L1Q9UHC9 1359 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 A0A1W2PQ27 194 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 A0A1W2PQ64 194 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 A0A1W2PQC6 194 aa7.49□□□□□ -1.21
LINC00254-202ENST00000633813 A0A1W2PQD8 194 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms