RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 RPS12P25398 132 aaKnown RBP21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 COPB1P53618 953 aaKnown RBP21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 FILIP1LQ4L180 1135 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 TTI2Q6NXR4 508 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 ZNF341Q9BYN7 854 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 SLC39A2Q9NP94 309 aa21.99■■□□□ 1.11
CHRNA4-209ENST00000627000 PSDA5PKW4 1024 aaPredicted RBP21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 LRRC10BA6NIK2 292 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 CFBP00751 764 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 MCTP2Q6DN12 878 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 NYAP1Q6ZVC0 841 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 CCDC112Q8NEF3 446 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 CYP2W1Q8TAV3 490 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 TRIM47Q96LD4 638 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 SH2D4AQ9H788 454 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 CNOT7Q9UIV1 285 aaKnown RBP21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 PIK3CDO00329 1044 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 N4BP3O15049 544 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 CEP135Q66GS9 1140 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 UNC13DQ70J99 1090 aa21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 DHTKD1Q96HY7 919 aaPredicted RBP21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 DUSP9Q99956 384 aaKnown RBP21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 SRRTQ9BXP5 876 aaKnown RBP21.98■■□□□ 1.11
CHRNA4-209ENST00000627000 POTEB3A0JP26 581 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 POTECB2RU33 542 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 INPP5BP32019 993 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 KCNJ6P48051 423 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 SPAG1Q07617 926 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 DGKZQ13574 1117 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 Q4G0T1 1027 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 POTEBQ6S5H4 581 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 MYRIPQ8NFW9 859 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 NLGN2Q8NFZ4 835 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 DDX12PQ92771 950 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 EEF2KMTQ96G04 330 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 PPP1R13BQ96KQ4 1090 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 FEZ1Q99689 392 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 HACL1Q9UJ83 578 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 E9PMD0 336 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 FZD9O00144 591 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 PTGER2P43116 358 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 RBL2Q08999 1139 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 SPIRE1Q08AE8 756 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 TNFAIP1Q13829 316 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 HYIQ5T013 277 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 ANKRD40Q6AI12 368 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 CNNM4Q6P4Q7 775 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 SLFN12Q8IYM2 578 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 P2RX5Q93086 422 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 KIAA1024Q9UPX6 916 aa21.97■■□□□ 1.11
CHRNA4-209ENST00000627000 LTBP3Q9NS15 1303 aa21.96■■□□□ 1.11
CHRNA4-209ENST00000627000 MED24O75448 989 aa21.96■■□□□ 1.11
CHRNA4-209ENST00000627000 IDEP14735 1019 aa21.96■■□□□ 1.11
CHRNA4-209ENST00000627000 CCNE1P24864 410 aa21.96■■□□□ 1.11
CHRNA4-209ENST00000627000 PTPN14Q15678 1187 aa21.96■■□□□ 1.11
CHRNA4-209ENST00000627000 FAM160B2Q86V87 743 aa21.96■■□□□ 1.11
CHRNA4-209ENST00000627000 CPLX3Q8WVH0 158 aa21.96■■□□□ 1.11
CHRNA4-209ENST00000627000 FEM1BQ9UK73 627 aa21.96■■□□□ 1.11
CHRNA4-209ENST00000627000 ZNF541Q9H0D2 1346 aa21.95■■□□□ 1.11
CHRNA4-209ENST00000627000 PLA2G6O60733 806 aa21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 CIITAP33076 1130 aa21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 BAG1Q99933 345 aaPredicted RBP21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 KDM3AQ9Y4C1 1321 aa21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 PVALEFA0A1B0GWK0 134 aa21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 MSH4O15457 936 aa21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 SSBP05455 408 aaKnown RBP eCLIP21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 ANKRD20A12PQ8NF67 263 aa21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 ZNF592Q92610 1267 aa21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 THAP9Q9H5L6 903 aa21.95■■□□□ 1.1
CHRNA4-209ENST00000627000 RIOK3O14730 519 aaKnown RBP21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 UBXN2AP68543 259 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 NCAPH2Q6IBW4 605 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 LDHDQ86WU2 507 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 CSGALNACT2Q8N6G5 542 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 NT5C3AQ9H0P0 336 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 AKR1B15C9JRZ8 316 aaPredicted RBP21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 GCOM1H8Y6P7 765 aaPredicted RBP21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 TBX3O15119 743 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 CYP3A4P08684 503 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 POLR2MP0CAP2 368 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 ZNF76P36508 570 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 KIF4BQ2VIQ3 1234 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 NBPF12Q5TAG4 269 aaPredicted RBP21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 GLIS3Q8NEA6 775 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 DNAJC19Q96DA6 116 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 DEFB129Q9H1M3 183 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 SEMA6BQ9H3T3 888 aa21.94■■□□□ 1.1
CHRNA4-209ENST00000627000 TRAF1Q13077 416 aa21.93■■□□□ 1.1
CHRNA4-209ENST00000627000 COBLL1Q53SF7 1204 aa21.93■■□□□ 1.1
CHRNA4-209ENST00000627000 SLC30A10Q6XR72 485 aa21.93■■□□□ 1.1
CHRNA4-209ENST00000627000 PPFIBP1Q86W92 1011 aa21.93■■□□□ 1.1
CHRNA4-209ENST00000627000 AGBL1Q96MI9 1066 aa21.93■■□□□ 1.1
CHRNA4-209ENST00000627000 IGLV3-22A0A075B6J6 115 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 POTEFA5A3E0 1075 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 ARHGAP6O43182 974 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 GYPCP04921 128 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 POTEIP0CG38 1075 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 CASP14P31944 242 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 EHHADHQ08426 723 aa21.92■■□□□ 1.1
CHRNA4-209ENST00000627000 POTEGQ6S5H5 508 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms