RNA–Protein interactions for RNA: ENST00000625033.1

PCDHB2-205, Transcript of protocadherin beta 2, humanhuman

TSL 4 BASIC

Gene PCDHB2, Length 519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-205ENST00000625033 EPHB4P54760 987 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 ITGA7Q13683 1181 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 TTLL4Q14679 1199 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 TYW1BQ6NUM6 668 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 CCDC82Q8N4S0 544 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 GPKOWQ92917 476 aaPredicted RBP eCLIP12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 AGXT2Q9BYV1 514 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 DDX41Q9UJV9 622 aaKnown RBP12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 SIP14410 1827 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
PCDHB2-205ENST00000625033 KLF18A0A0U1RQI7 1052 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 PIK3CDO00329 1044 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 ZBTB43O43298 467 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 EPB41L2O43491 1005 aaKnown RBP12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 B4GALT4O60513 344 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 EIF3JO75822 258 aaKnown RBP12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 CABYRO75952 493 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 REC8O95072 547 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 MMP3P08254 477 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 HMGB1P09429 215 aaKnown RBP12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 RPS6KB1P23443 525 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 CPT1AP50416 773 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 MRPS9P82933 396 aaKnown RBP12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 LRIT3Q3SXY7 679 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 C9orf50Q5SZB4 431 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 USP17L6PQ6QN14 398 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 Q6ZUG5 572 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 VSIG10LQ86VR7 867 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 PPP1R13LQ8WUF5 828 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 USP26Q9BXU7 913 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 TMEM39AQ9NV64 488 aa12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 SEC63Q9UGP8 760 aaKnown RBP12.81□□□□□ -0.36
PCDHB2-205ENST00000625033 GOLGA8AA7E2F4 631 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 GOLGA8BA8MQT2 603 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 DCDC2CA8MYV0 355 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 ZEB2O60315 1214 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 MYL3P08590 195 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 MYCLP12524 364 aaPredicted RBP12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 SP2Q02086 613 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 APOBRQ0VD83 1088 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 RTN1Q16799 776 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 WWC2Q6AWC2 1192 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 BLOC1S2Q6QNY1 142 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 AFG1LQ8WV93 481 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 BRF1Q92994 677 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 EMID1Q96A84 441 aaPredicted RBP12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 POLR3EQ9NVU0 708 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 RBM28Q9NW13 759 aaKnown RBP12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 UMODL1Q5DID0 1318 aa12.8□□□□□ -0.36
PCDHB2-205ENST00000625033 TIMP1P01033 207 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 GH1P01241 217 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 RAG1P15918 1043 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 CASTP20810 708 aaKnown RBP12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 RCAN1P53805 252 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 SHHQ15465 462 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 UBE2SQ16763 222 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 KAT2BQ92831 832 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 MTG1Q9BT17 334 aaPredicted RBP12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 TRPV6Q9H1D0 765 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 ALDH8A1Q9H2A2 487 aaPredicted RBP12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 BCAS3Q9H6U6 928 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 MRVI1Q9Y6F6 885 aa12.79□□□□□ -0.36
PCDHB2-205ENST00000625033 STXBP3O00186 592 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 HOXD8P13378 290 aaPredicted RBP12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 CCND2P30279 289 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 ADD1P35611 737 aaKnown RBP12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 TOB2Q14106 344 aaPredicted RBP12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 GPR153Q6NV75 609 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 SYNE3Q6ZMZ3 975 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 HEATR3Q7Z4Q2 680 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 TET1Q8NFU7 2136 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 PPP1R12CQ9BZL4 782 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 ZSWIM6Q9HCJ5 1215 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 TRMT13Q9NUP7 481 aaKnown RBP12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 TELO2Q9Y4R8 837 aa12.78□□□□□ -0.36
PCDHB2-205ENST00000625033 ADAMTS3O15072 1205 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 TLR3O15455 904 aaKnown RBP12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 SORBS3O60504 671 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 ICAM3P32942 547 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 METAP2P50579 478 aaKnown RBP eCLIP12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 EVCP57679 992 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 FPGSQ05932 587 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 NBPF20Q3BBV1 942 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 HSDL1Q3SXM5 330 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 CELF3Q5SZQ8 465 aaKnown RBP12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 MYSM1Q5VVJ2 828 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 PCNX4Q63HM2 1172 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 MFSD5Q6N075 450 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 RUFY3Q7L099 469 aa12.77□□□□□ -0.37
PCDHB2-205ENST00000625033 C16orf59Q7L2K0 433 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms