RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 UNC45AQ9H3U1 944 aa8.68□□□□□ -1.02
VPS11-209ENST00000622309 EPB41L5Q9HCM4 733 aa8.68□□□□□ -1.02
VPS11-209ENST00000622309 SCOCQ9UIL1 159 aa8.68□□□□□ -1.02
VPS11-209ENST00000622309 IGF2BP3O00425 579 aaKnown RBP eCLIP8.67□□□□□ -1.02
VPS11-209ENST00000622309 TAF5LO75529 589 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 FAM153BP0C7A2 387 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 DRD4P21917 467 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 CDC25AP30304 524 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 PBX1P40424 430 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 PSMC4P43686 418 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 BAG6P46379 1132 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 CARSP49589 748 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 CCNG1P51959 295 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 GUCY2DQ02846 1103 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 BIRC3Q13489 604 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 FAM153CQ494X1 144 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 CCDC92Q53HC0 331 aaPredicted RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 HAUS3Q68CZ6 603 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 MPRIPQ6WCQ1 1025 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 TRPM8Q7Z2W7 1104 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 ZNF589Q86UQ0 364 aaPredicted RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 WDR66Q8TBY9 1149 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 DDX27Q96GQ7 796 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 ZNHIT6Q9NWK9 470 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 SPATA7Q9P0W8 599 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 SUN2Q9UH99 717 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 FAM153AQ9UHL3 310 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 SLC12A6Q9UHW9 1150 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 PAIP2BQ9ULR5 123 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 SNX12Q9UMY4 172 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 REXO2Q9Y3B8 237 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 BZW2Q9Y6E2 419 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 ITIH6Q6UXX5 1313 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 ARHGEF10O15013 1369 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 TOPAZ1Q8N9V7 1692 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 MBD4O95243 580 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 KIAA0753Q2KHM9 967 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 BEND3Q5T5X7 828 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 OGFOD1Q8N543 542 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 WHAMMQ8TF30 809 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 GBP5Q96PP8 586 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 BOLA2Q9H3K6 86 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 CRB1P82279 1406 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 SYNRGQ9UMZ2 1314 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 KCNQ3O43525 872 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 PPP6R2O75170 966 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 TMCC1O94876 653 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 PENKP01210 267 aaPredicted RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 VIL1P09327 827 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 CYLC1P35663 651 aaPredicted RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 NLRP5P59047 1200 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 KIF5AQ12840 1032 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 ITIH4Q14624 930 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 SH2D4BQ5SQS7 431 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 RESP18Q5W5W9 173 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 CREG2Q8IUH2 290 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 MREGQ8N565 214 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 RBM46Q8TBY0 533 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 ANKRD24Q8TF21 1146 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 MRRFQ96E11 262 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 IWS1Q96ST2 819 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 ECT2Q9H8V3 914 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 ARIH1Q9Y4X5 557 aaPredicted RBP8.67□□□□□ -1.02
VPS11-209ENST00000622309 N6AMT1Q9Y5N5 214 aa8.67□□□□□ -1.02
VPS11-209ENST00000622309 PIK3C2AO00443 1686 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 CPLX1O14810 134 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 CTNND1O60716 968 aaKnown RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 TACC1O75410 805 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 HEXIM1O94992 359 aaKnown RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 ATP6V1C1P21283 382 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 IL4RP24394 825 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 MSH2P43246 934 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 MORC3Q14149 939 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 LONRF1Q17RB8 773 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 TTC39AQ5SRH9 613 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 LLGL2Q6P1M3 1020 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 CCDC80Q76M96 950 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 DEFB132Q7Z7B7 95 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 RNF10Q8N5U6 811 aaKnown RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 SNRKQ9NRH2 765 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 NOVA2Q9UNW9 492 aaKnown RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 ESYT3A0FGR9 886 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 A8MUI8 341 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 CETN3O15182 167 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 USO1O60763 962 aaKnown RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 GSTA2P09210 222 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 TCP1P17987 556 aaKnown RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 HERVK_113P62684 666 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 PRPF4BQ13523 1007 aaKnown RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 HLTFQ14527 1009 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS11-209ENST00000622309 PABPC1LQ4VXU2 614 aaKnown RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 RASIP1Q5U651 963 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
VPS11-209ENST00000622309 PSMB7Q99436 277 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 VPS16Q9H269 839 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 SYNPO2Q9UMS6 1093 aa8.66□□□□□ -1.02
VPS11-209ENST00000622309 WDR37Q9Y2I8 494 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms