RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 FILIP1LQ4L180 1135 aa21.33■■□□□ 1
PSPC1-206ENST00000619300 CNNM4Q6P4Q7 775 aa21.33■■□□□ 1
PSPC1-206ENST00000619300 SAMD1Q6SPF0 538 aaPredicted RBP21.33■■□□□ 1
PSPC1-206ENST00000619300 KCNK18Q7Z418 384 aa21.33■■□□□ 1
PSPC1-206ENST00000619300 LDHDQ86WU2 507 aa21.33■■□□□ 1
PSPC1-206ENST00000619300 FAM20AQ96MK3 541 aa21.33■■□□□ 1
PSPC1-206ENST00000619300 LIMA1Q9UHB6 759 aaKnown RBP21.33■■□□□ 1
PSPC1-206ENST00000619300 ABCB11O95342 1321 aa21.32■■□□□ 1
PSPC1-206ENST00000619300 WDR46O15213 610 aaKnown RBP21.32■■□□□ 1
PSPC1-206ENST00000619300 STK4Q13043 487 aa21.32■■□□□ 1
PSPC1-206ENST00000619300 ZNF76P36508 570 aa21.31■■□□□ 1
PSPC1-206ENST00000619300 PPP1R2P41236 205 aa21.31■■□□□ 1
PSPC1-206ENST00000619300 DCAF15Q66K64 600 aa21.31■■□□□ 1
PSPC1-206ENST00000619300 UNC13DQ70J99 1090 aa21.31■■□□□ 1
PSPC1-206ENST00000619300 PRPF38AQ8NAV1 312 aaKnown RBP21.31■■□□□ 1
PSPC1-206ENST00000619300 TEX33O43247 280 aa21.31■■□□□ 1
PSPC1-206ENST00000619300 TERF1P54274 439 aa21.31■■□□□ 1
PSPC1-206ENST00000619300 COBLL1Q53SF7 1204 aa21.31■■□□□ 1
PSPC1-206ENST00000619300 TCP11X2Q5H9J9 407 aa21.31■■□□□ 1
PSPC1-206ENST00000619300 FCER1AP12319 257 aa21.3■■□□□ 1
PSPC1-206ENST00000619300 PMS1P54277 932 aaKnown RBP21.3■■□□□ 1
PSPC1-206ENST00000619300 SPIRE1Q08AE8 756 aa21.3■■□□□ 1
PSPC1-206ENST00000619300 KRT31Q15323 416 aa21.3■■□□□ 1
PSPC1-206ENST00000619300 CCDC112Q8NEF3 446 aa21.3■■□□□ 1
PSPC1-206ENST00000619300 ANKRD20A12PQ8NF67 263 aa21.3■■□□□ 1
PSPC1-206ENST00000619300 SLF1Q9BQI6 1058 aa21.3■■□□□ 1
PSPC1-206ENST00000619300 KCND1Q9NSA2 647 aa21.3■■□□□ 1
PSPC1-206ENST00000619300 KIAA1024Q9UPX6 916 aa21.3■■□□□ 1
PSPC1-206ENST00000619300 TRIM49BA6NDI0 452 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 KCNJ18B7U540 433 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 MSH4O15457 936 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 ICAM1P05362 532 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 STAT3P40763 770 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 KCNJ12Q14500 433 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 ANGEL2Q5VTE6 544 aaKnown RBP21.29■■□□□ 1
PSPC1-206ENST00000619300 ARHGAP27Q6ZUM4 889 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 DYMQ7RTS9 669 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 APOBEC3FQ8IUX4 373 aaKnown RBP21.29■■□□□ 1
PSPC1-206ENST00000619300 CYP2W1Q8TAV3 490 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 DDX12PQ92771 950 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 HOOK2Q96ED9 719 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 TMX1Q9H3N1 280 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 CCNE1P24864 410 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 KCNJ6P48051 423 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 TTI2Q6NXR4 508 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 IRF2BP1Q8IU81 584 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 GPRC5DQ9NZD1 345 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 ZNF112Q9UJU3 913 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 STK24Q9Y6E0 443 aa21.29■■□□□ 1
PSPC1-206ENST00000619300 LMNB1P20700 586 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 PBX1P40424 430 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 ERMNQ8TAM6 284 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 NOC3LQ8WTT2 800 aaKnown RBP21.28■■□□□ 1
PSPC1-206ENST00000619300 P2RX5Q93086 422 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 AGBL1Q96MI9 1066 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 THAP9Q9H5L6 903 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 EHMT1Q9H9B1 1298 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 ZNF536O15090 1300 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 IGLV3-22A0A075B6J6 115 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 BICDL2A1A5D9 508 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 HOXA7P31268 230 aaPredicted RBP21.28■■□□□ 1
PSPC1-206ENST00000619300 HAUS3Q68CZ6 603 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 GPC2Q8N158 579 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 CCAR2Q8N163 923 aaKnown RBP21.28■■□□□ 1
PSPC1-206ENST00000619300 KIAA0895Q8NCT3 520 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 TRPM4Q8TD43 1214 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 TRIM47Q96LD4 638 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 SRRTQ9BXP5 876 aaKnown RBP21.28■■□□□ 1
PSPC1-206ENST00000619300 SLC39A2Q9NP94 309 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 BMP2KQ9NSY1 1161 aaPredicted RBP21.28■■□□□ 1
PSPC1-206ENST00000619300 CCPG1Q9ULG6 757 aa21.28■■□□□ 1
PSPC1-206ENST00000619300 POTEB3A0JP26 581 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 POTECB2RU33 542 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 N4BP3O15049 544 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 MED24O75448 989 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 COPB1P53618 953 aaKnown RBP21.27■■□□□ 1
PSPC1-206ENST00000619300 PSMD2Q13200 908 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 POTEBQ6S5H4 581 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 HPS3Q969F9 1004 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 DUSP9Q99956 384 aaKnown RBP21.27■■□□□ 1
PSPC1-206ENST00000619300 EMILIN3Q9NT22 766 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 SMCHD1A6NHR9 2005 aa21.27■■□□□ 1
PSPC1-206ENST00000619300 E9PMD0 336 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 PLA2G4BP0C869 781 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 IDEP14735 1019 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 USP14P54578 494 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 GOLGA8FQ08AF8 430 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 GOLGA8DPQ0D2H9 430 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 MTMR2Q13614 643 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 ANKRD40Q6AI12 368 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 NCAPH2Q6IBW4 605 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 CREBRFQ8IUR6 639 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 SCYL3Q8IZE3 742 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 DNAJC19Q96DA6 116 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 WDR18Q9BV38 432 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 USP27XA6NNY8 438 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 EEF1GP26641 437 aaKnown RBP21.26■□□□□ 0.99
PSPC1-206ENST00000619300 RPA1P27694 616 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 EHHADHQ08426 723 aa21.26■□□□□ 0.99
PSPC1-206ENST00000619300 PRAMEF18Q5VWM3 479 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms