RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PCNX4Q63HM2 1172 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 SLC39A5Q6ZMH5 540 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 TLK2Q86UE8 772 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 FAM177A1Q8N128 213 aaPredicted RBP9.5□□□□□ -0.89
NEK3-209ENST00000618856 SLC43A3Q8NBI5 491 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 PCSK9Q8NBP7 692 aaKnown RBP9.5□□□□□ -0.89
NEK3-209ENST00000618856 CRYGNQ8WXF5 182 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 GPKOWQ92917 476 aaPredicted RBP eCLIP9.5□□□□□ -0.89
NEK3-209ENST00000618856 INPP4AQ96PE3 977 aaPredicted RBP9.5□□□□□ -0.89
NEK3-209ENST00000618856 ZMYND12Q9H0C1 365 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 PRO3102Q9H379 93 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 NCOA5Q9HCD5 579 aaKnown RBP9.5□□□□□ -0.89
NEK3-209ENST00000618856 DDX41Q9UJV9 622 aaKnown RBP9.5□□□□□ -0.89
NEK3-209ENST00000618856 CEP290O15078 2479 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 ELP1O95163 1332 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 A0A1W2PQ45 241 aaPredicted RBP9.49□□□□□ -0.89
NEK3-209ENST00000618856 A0A1W2PQY0 241 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 DYNC1LI2O43237 492 aaPredicted RBP9.49□□□□□ -0.89
NEK3-209ENST00000618856 ASGR1P07306 291 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 C6orf222P0C671 652 aaPredicted RBP9.49□□□□□ -0.89
NEK3-209ENST00000618856 HOXD8P13378 290 aaPredicted RBP9.49□□□□□ -0.89
NEK3-209ENST00000618856 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
NEK3-209ENST00000618856 ARHGAP1Q07960 439 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 SCRN1Q12765 414 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 TTLL4Q14679 1199 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 FSCN1Q16658 493 aaKnown RBP9.49□□□□□ -0.89
NEK3-209ENST00000618856 KCNV1Q6PIU1 500 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 ANKRD33Q7Z3H0 272 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 HEATR3Q7Z4Q2 680 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 CUL5Q93034 780 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 PHKBQ93100 1093 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 SENP6Q9GZR1 1112 aaPredicted RBP9.49□□□□□ -0.89
NEK3-209ENST00000618856 GLT8D2Q9H1C3 349 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 SPC25Q9HBM1 224 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 SH3GLB2Q9NR46 395 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 GRIN2DO15399 1336 aa9.49□□□□□ -0.89
NEK3-209ENST00000618856 SMCO2A6NFE2 343 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 SPATA31C2B4DYI2 1134 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 H0YGN5 161 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 ADAMTS3O15072 1205 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 CABYRO75952 493 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 CTDNEP1O95476 244 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 FOSP01100 380 aaPredicted RBP9.48□□□□□ -0.89
NEK3-209ENST00000618856 TXNP10599 105 aaKnown RBP9.48□□□□□ -0.89
NEK3-209ENST00000618856 CCND2P30279 289 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 NAPAP54920 295 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 BEX3Q00994 111 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 SP2Q02086 613 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 NPY5RQ15761 445 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 ME3Q16798 604 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 GNASQ5JWF2 1037 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 SMARCC2Q8TAQ2 1214 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 DPF3Q92784 378 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 TOX2Q96NM4 488 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 LARP6Q9BRS8 491 aaKnown RBP9.48□□□□□ -0.89
NEK3-209ENST00000618856 SEZ6LQ9BYH1 1024 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 C22orf23Q9BZE7 217 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 AP5M1Q9H0R1 490 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 PCDHA6Q9UN73 950 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 PCDHA8Q9Y5H6 950 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 UBIAD1Q9Y5Z9 338 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 STK36Q9NRP7 1315 aa9.48□□□□□ -0.89
NEK3-209ENST00000618856 M0R2N6 131 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 EVI5O60447 810 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 KPNA6O60684 536 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 DEXIO95424 95 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 ITGB5P18084 799 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 CPT1AP50416 773 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 ADCY7P51828 1080 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 NEK4P51957 841 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 RTP1P59025 263 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 PURAQ00577 322 aaKnown RBP9.47□□□□□ -0.89
NEK3-209ENST00000618856 ST3GAL1Q11201 340 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 AP3B2Q13367 1082 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 LAMC2Q13753 1193 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 UBE2SQ16763 222 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 LY6KQ17RY6 165 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 MYSM1Q5VVJ2 828 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 MCTP2Q6DN12 878 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 SEPT14Q6ZU15 432 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 COPS5Q92905 334 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 GTF3C6Q969F1 213 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 FERMT2Q96AC1 680 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 GLT1D1Q96MS3 346 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 SENP7Q9BQF6 1050 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 SLC26A6Q9BXS9 759 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 NAP1L2Q9ULW6 460 aaPredicted RBP9.47□□□□□ -0.89
NEK3-209ENST00000618856 NR2E3Q9Y5X4 410 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 LAMA3Q16787 3333 aa9.47□□□□□ -0.89
NEK3-209ENST00000618856 SCN10AQ9Y5Y9 1956 aa9.46□□□□□ -0.89
NEK3-209ENST00000618856 SPDYE3A6NKU9 549 aa9.46□□□□□ -0.9
NEK3-209ENST00000618856 ARVCFO00192 962 aa9.46□□□□□ -0.9
NEK3-209ENST00000618856 MAFGO15525 162 aa9.46□□□□□ -0.9
NEK3-209ENST00000618856 FIBPO43427 364 aa9.46□□□□□ -0.9
NEK3-209ENST00000618856 EDIL3O43854 480 aa9.46□□□□□ -0.9
NEK3-209ENST00000618856 ZEB2O60315 1214 aa9.46□□□□□ -0.9
NEK3-209ENST00000618856 CDKL5O76039 1030 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms