RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 MAP9Q49MG5 647 aa8.81□□□□□ -1
CHD7-212ENST00000618450 GUF1Q8N442 669 aaKnown RBP8.81□□□□□ -1
CHD7-212ENST00000618450 MS4A14Q96JA4 679 aa8.81□□□□□ -1
CHD7-212ENST00000618450 GANQ9H2C0 597 aa8.81□□□□□ -1
CHD7-212ENST00000618450 KCTD10Q9H3F6 313 aa8.81□□□□□ -1
CHD7-212ENST00000618450 A1CFQ9NQ94 594 aaKnown RBP8.81□□□□□ -1
CHD7-212ENST00000618450 ESYT2A0FGR8 921 aa8.81□□□□□ -1
CHD7-212ENST00000618450 PSMA7O14818 248 aa8.81□□□□□ -1
CHD7-212ENST00000618450 AKAP17AQ02040 695 aaKnown RBP8.81□□□□□ -1
CHD7-212ENST00000618450 NAB2Q15742 525 aa8.81□□□□□ -1
CHD7-212ENST00000618450 CRYGNQ8WXF5 182 aa8.81□□□□□ -1
CHD7-212ENST00000618450 RIOX1Q9H6W3 641 aa8.81□□□□□ -1
CHD7-212ENST00000618450 BTG4Q9NY30 223 aa8.81□□□□□ -1
CHD7-212ENST00000618450 AIPL1Q9NZN9 384 aa8.81□□□□□ -1
CHD7-212ENST00000618450 STXBP5LQ9Y2K9 1186 aa8.81□□□□□ -1
CHD7-212ENST00000618450 KRT14P02533 472 aa8.81□□□□□ -1
CHD7-212ENST00000618450 HOXD13P35453 343 aa8.81□□□□□ -1
CHD7-212ENST00000618450 SLFN11Q7Z7L1 901 aa8.81□□□□□ -1
CHD7-212ENST00000618450 ZFP91Q96JP5 570 aaPredicted RBP8.81□□□□□ -1
CHD7-212ENST00000618450 CEP89Q96ST8 783 aa8.81□□□□□ -1
CHD7-212ENST00000618450 GEMIN8Q9NWZ8 242 aaKnown RBP8.81□□□□□ -1
CHD7-212ENST00000618450 IGKV6D-41A0A0C4DH26 115 aa8.8□□□□□ -1
CHD7-212ENST00000618450 USP17L3A6NCW0 530 aa8.8□□□□□ -1
CHD7-212ENST00000618450 USP17L4A6NCW7 530 aa8.8□□□□□ -1
CHD7-212ENST00000618450 RASSF9O75901 435 aa8.8□□□□□ -1
CHD7-212ENST00000618450 HSPA9P38646 679 aaKnown RBP8.8□□□□□ -1
CHD7-212ENST00000618450 SLC1A4P43007 532 aa8.8□□□□□ -1
CHD7-212ENST00000618450 USP17L1Q7RTZ2 530 aa8.8□□□□□ -1
CHD7-212ENST00000618450 IRF2BP2Q7Z5L9 587 aa8.8□□□□□ -1
CHD7-212ENST00000618450 HAS1Q92839 578 aa8.8□□□□□ -1
CHD7-212ENST00000618450 TMEM47Q9BQJ4 181 aa8.8□□□□□ -1
CHD7-212ENST00000618450 SYT11Q9BT88 431 aa8.8□□□□□ -1
CHD7-212ENST00000618450 CAPS2Q9BXY5 557 aa8.8□□□□□ -1
CHD7-212ENST00000618450 EPB41L4BQ9H329 900 aa8.8□□□□□ -1
CHD7-212ENST00000618450 RNF216Q9NWF9 866 aaPredicted RBP8.8□□□□□ -1
CHD7-212ENST00000618450 GOLGA6CA6NDK9 693 aa8.8□□□□□ -1
CHD7-212ENST00000618450 SLC37A4O43826 429 aa8.8□□□□□ -1
CHD7-212ENST00000618450 GOLGA6DP0CG33 693 aa8.8□□□□□ -1
CHD7-212ENST00000618450 TCP1P17987 556 aaKnown RBP8.8□□□□□ -1
CHD7-212ENST00000618450 IGHMBP2P38935 993 aaKnown RBP8.8□□□□□ -1
CHD7-212ENST00000618450 GFPT1Q06210 699 aaPredicted RBP8.8□□□□□ -1
CHD7-212ENST00000618450 UNC13DQ70J99 1090 aa8.8□□□□□ -1
CHD7-212ENST00000618450 CABP7Q86V35 215 aa8.8□□□□□ -1
CHD7-212ENST00000618450 CASKIN2Q8WXE0 1202 aa8.8□□□□□ -1
CHD7-212ENST00000618450 DYNLL2Q96FJ2 89 aa8.8□□□□□ -1
CHD7-212ENST00000618450 HINFPQ9BQA5 517 aa8.8□□□□□ -1
CHD7-212ENST00000618450 GOLGA6AQ9NYA3 693 aa8.8□□□□□ -1
CHD7-212ENST00000618450 MACROD2A1Z1Q3 448 aa8.8□□□□□ -1
CHD7-212ENST00000618450 MRPS25P82663 173 aaKnown RBP8.8□□□□□ -1
CHD7-212ENST00000618450 AMIGO3Q86WK7 504 aa8.8□□□□□ -1
CHD7-212ENST00000618450 MARCH10Q8NA82 808 aaPredicted RBP8.8□□□□□ -1
CHD7-212ENST00000618450 FAM76AQ8TAV0 307 aa8.8□□□□□ -1
CHD7-212ENST00000618450 TRIM47Q96LD4 638 aa8.8□□□□□ -1
CHD7-212ENST00000618450 RNPC3Q96LT9 517 aaKnown RBP8.8□□□□□ -1
CHD7-212ENST00000618450 IFIH1Q9BYX4 1025 aaKnown RBP8.8□□□□□ -1
CHD7-212ENST00000618450 RGPD3A6NKT7 1758 aaPredicted RBP8.79□□□□□ -1
CHD7-212ENST00000618450 RGPD4Q7Z3J3 1758 aa8.79□□□□□ -1
CHD7-212ENST00000618450 BICDL2A1A5D9 508 aa8.79□□□□□ -1
CHD7-212ENST00000618450 PPP1R11O60927 126 aaPredicted RBP8.79□□□□□ -1
CHD7-212ENST00000618450 PAEPP09466 180 aa8.79□□□□□ -1
CHD7-212ENST00000618450 OR52Z1P0C646 297 aa8.79□□□□□ -1
CHD7-212ENST00000618450 HNRNPH1P31943 449 aaKnown RBP8.79□□□□□ -1
CHD7-212ENST00000618450 CXCR5P32302 372 aa8.79□□□□□ -1
CHD7-212ENST00000618450 PPP1R2P41236 205 aa8.79□□□□□ -1
CHD7-212ENST00000618450 CCT5P48643 541 aa8.79□□□□□ -1
CHD7-212ENST00000618450 CHADLQ6NUI6 762 aa8.79□□□□□ -1
CHD7-212ENST00000618450 TRIM59Q8IWR1 403 aa8.79□□□□□ -1
CHD7-212ENST00000618450 NOC4LQ9BVI4 516 aaKnown RBP8.79□□□□□ -1
CHD7-212ENST00000618450 NEUROG2Q9H2A3 272 aa8.79□□□□□ -1
CHD7-212ENST00000618450 LOC102724428A0A0B4J2F2 783 aa8.79□□□□□ -1
CHD7-212ENST00000618450 GRID2IPA4D2P6 1211 aa8.79□□□□□ -1
CHD7-212ENST00000618450 C5orf60A6NFR6 353 aa8.79□□□□□ -1
CHD7-212ENST00000618450 SIK1P57059 783 aa8.79□□□□□ -1
CHD7-212ENST00000618450 APBA1Q02410 837 aa8.79□□□□□ -1
CHD7-212ENST00000618450 PDIA5Q14554 519 aa8.79□□□□□ -1
CHD7-212ENST00000618450 CDC37Q16543 378 aaPredicted RBP8.79□□□□□ -1
CHD7-212ENST00000618450 MAN2A1Q16706 1144 aa8.79□□□□□ -1
CHD7-212ENST00000618450 ZNF568Q3ZCX4 644 aa8.79□□□□□ -1
CHD7-212ENST00000618450 MMS22LQ6ZRQ5 1243 aa8.79□□□□□ -1
CHD7-212ENST00000618450 FAM228AQ86W67 206 aa8.79□□□□□ -1
CHD7-212ENST00000618450 RTFDC1Q9BY42 306 aaPredicted RBP8.79□□□□□ -1
CHD7-212ENST00000618450 TOMM22Q9NS69 142 aa8.79□□□□□ -1
CHD7-212ENST00000618450 ABCF2Q9UG63 623 aa8.79□□□□□ -1
CHD7-212ENST00000618450 HYOU1Q9Y4L1 999 aa8.79□□□□□ -1
CHD7-212ENST00000618450 SPATA31A1Q5TZJ5 1347 aa8.79□□□□□ -1
CHD7-212ENST00000618450 TRIM21P19474 475 aaKnown RBP8.79□□□□□ -1
CHD7-212ENST00000618450 NAP1L1P55209 391 aaKnown RBP8.79□□□□□ -1
CHD7-212ENST00000618450 TFAP4Q01664 338 aa8.79□□□□□ -1
CHD7-212ENST00000618450 LRRC63Q05C16 580 aa8.79□□□□□ -1
CHD7-212ENST00000618450 KIF5AQ12840 1032 aa8.79□□□□□ -1
CHD7-212ENST00000618450 TTC31Q49AM3 519 aaPredicted RBP8.79□□□□□ -1
CHD7-212ENST00000618450 C15orf52Q6ZUT6 534 aaKnown RBP8.79□□□□□ -1
CHD7-212ENST00000618450 RASGEF1CQ8N431 466 aa8.79□□□□□ -1
CHD7-212ENST00000618450 SH2D3CQ8N5H7 860 aa8.79□□□□□ -1
CHD7-212ENST00000618450 PLIN2Q99541 437 aa8.79□□□□□ -1
CHD7-212ENST00000618450 KAT6BQ8WYB5 2073 aa8.79□□□□□ -1
CHD7-212ENST00000618450 HOXA7P31268 230 aaPredicted RBP8.78□□□□□ -1
CHD7-212ENST00000618450 PDE4DQ08499 809 aa8.78□□□□□ -1
CHD7-212ENST00000618450 SND1Q7KZF4 910 aaKnown RBP eCLIP8.78□□□□□ -1
CHD7-212ENST00000618450 C2CD5Q86YS7 1000 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms