RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 E9PMD0 336 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 CHMP2AO43633 222 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 PTPRAP18433 802 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 PMS1P54277 932 aaKnown RBP8.76□□□□□ -1.01
NEK3-207ENST00000617054 MUM1L1Q5H9M0 696 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 MLKLQ8NB16 471 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 CDK5RAP3Q96JB5 506 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 GSDMAQ96QA5 445 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 BLOC1S4Q9NUP1 217 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 COL20A1Q9P218 1284 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 RIPK3Q9Y572 518 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 NPHP3-ACAD11A0A0J9YXS1 232 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 POTEB3A0JP26 581 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 POTECB2RU33 542 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
NEK3-207ENST00000617054 CYP4A11Q02928 519 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 TMEM266Q2M3C6 531 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 NCAPH2Q6IBW4 605 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 POTEBQ6S5H4 581 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 SARM1Q6SZW1 724 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 GLIS3Q8NEA6 775 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 LENG9Q96B70 501 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 CALML4Q96GE6 196 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 PICK1Q9NRD5 415 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 KBTBD4Q9NVX7 518 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 FEM1BQ9UK73 627 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 KIAA1024Q9UPX6 916 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 DNAH12Q6ZR08 3092 aa8.76□□□□□ -1.01
NEK3-207ENST00000617054 IKBKBO14920 756 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 ZBTB39O15060 712 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 KLRC4O43908 158 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 PSMC6P62333 389 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 ASIC1P78348 528 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 STK4Q13043 487 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 ELOA2Q8IYF1 753 aaPredicted RBP8.75□□□□□ -1.01
NEK3-207ENST00000617054 ATG4CQ96DT6 458 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 KLRG1Q96E93 195 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 CCDC34Q96HJ3 373 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 SLF1Q9BQI6 1058 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 BCAS3Q9H6U6 928 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 SH2D4AQ9H788 454 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 SLC39A2Q9NP94 309 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 TBC1D7Q9P0N9 293 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 MYMKA6NI61 221 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 GCOM1H8Y6P7 765 aaPredicted RBP8.75□□□□□ -1.01
NEK3-207ENST00000617054 MSH4O15457 936 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 POLR2MP0CAP2 368 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 IDEP14735 1019 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 CCT6AP40227 531 aaKnown RBP8.75□□□□□ -1.01
NEK3-207ENST00000617054 FXR2P51116 673 aaKnown RBP eCLIP8.75□□□□□ -1.01
NEK3-207ENST00000617054 HS1BP3Q53T59 392 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 KRT79Q5XKE5 535 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 PRPF38AQ8NAV1 312 aaKnown RBP8.75□□□□□ -1.01
NEK3-207ENST00000617054 CRYGNQ8WXF5 182 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 AK8Q96MA6 479 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 WDR18Q9BV38 432 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 TRIM9Q9C026 710 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 INTS13Q9NVM9 706 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 RGL1Q9NZL6 768 aa8.75□□□□□ -1.01
NEK3-207ENST00000617054 POTEFA5A3E0 1075 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 DDX39AO00148 427 aaKnown RBP8.74□□□□□ -1.01
NEK3-207ENST00000617054 NKRFO15226 690 aaKnown RBP eCLIP8.74□□□□□ -1.01
NEK3-207ENST00000617054 MED24O75448 989 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 POTEIP0CG38 1075 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 USP11P51784 963 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 BACE1P56817 501 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 EAPPQ56P03 285 aaPredicted RBP8.74□□□□□ -1.01
NEK3-207ENST00000617054 POTEGQ6S5H5 508 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 POTEEQ6S8J3 1075 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 SCYL3Q8IZE3 742 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 FAM177A1Q8N128 213 aaPredicted RBP8.74□□□□□ -1.01
NEK3-207ENST00000617054 ZNF280CQ8ND82 737 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 IL31RAQ8NI17 732 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 MRFAP1L1Q96HT8 127 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 KIAA1683Q9H0B3 1180 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 KCNMB3Q9NPA1 279 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 ABCB11O95342 1321 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 ATAD5Q96QE3 1844 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 TEX33O43247 280 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 USP2O75604 605 aaPredicted RBP8.74□□□□□ -1.01
NEK3-207ENST00000617054 CLCN1P35523 988 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 SREBF1P36956 1147 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 TPM4P67936 248 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 LRRC41Q15345 812 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 GPR162Q16538 588 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 GPIHBP1Q8IV16 184 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 ETNPPLQ8TBG4 499 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 NELFBQ8WX92 580 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 CEP350Q5VT06 3117 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 SBF1O95248 1867 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 EML1O00423 815 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 ARP10275 920 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 AP3B2Q13367 1082 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 PLS1Q14651 629 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 TPD52L1Q16890 204 aaPredicted RBP8.74□□□□□ -1.01
NEK3-207ENST00000617054 DCAF15Q66K64 600 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 NSMFQ6X4W1 530 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 SV2BQ7L1I2 683 aa8.74□□□□□ -1.01
NEK3-207ENST00000617054 APOBEC3FQ8IUX4 373 aaKnown RBP8.74□□□□□ -1.01
NEK3-207ENST00000617054 TRIML1Q8N9V2 468 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms