RNA–Protein interactions for RNA: ENST00000616825.4

ATXN2-227, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ATXN2, Length 4,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-227ENST00000616825 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
ATXN2-227ENST00000616825 NT5C2P49902 561 aa19.3■□□□□ 0.68
ATXN2-227ENST00000616825 AFPP02771 609 aaKnown RBP19.29■□□□□ 0.68
ATXN2-227ENST00000616825 MMP1P03956 469 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 PUS7LQ9H0K6 701 aaKnown RBP19.29■□□□□ 0.68
ATXN2-227ENST00000616825 YEATS2Q9ULM3 1422 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 STAT2P52630 851 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 APBA1Q02410 837 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 LRRC41Q15345 812 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 USP17L2Q6R6M4 530 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 BBS5Q8N3I7 341 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 MIPOL1Q8TD10 442 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 COA7Q96BR5 231 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 TMEM206Q9H813 350 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 AKT3Q9Y243 479 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 GOLGA8KD6RF30 607 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 RAD17O75943 681 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 PTPREP23469 700 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 MED4Q9NPJ6 270 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 SEPT10Q9P0V9 454 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 SYNJ2BP-COX16A0A087WUM0 186 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 M0R2C6 588 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 DIXDC1Q155Q3 683 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 FOXP4Q8IVH2 680 aaPredicted RBP19.29■□□□□ 0.68
ATXN2-227ENST00000616825 RABGGTAQ92696 567 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 COX16Q9P0S2 106 aa19.29■□□□□ 0.68
ATXN2-227ENST00000616825 ESYT2A0FGR8 921 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 WDR46O15213 610 aaKnown RBP19.28■□□□□ 0.68
ATXN2-227ENST00000616825 ATP1A2P50993 1020 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 SATB1Q01826 763 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 RNF10Q8N5U6 811 aaKnown RBP19.28■□□□□ 0.68
ATXN2-227ENST00000616825 KCNQ4P56696 695 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 YWHAGP61981 247 aaKnown RBP eCLIP19.28■□□□□ 0.68
ATXN2-227ENST00000616825 ZSCAN26Q16670 478 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 PHLDB3Q6NSJ2 640 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 TAB3Q8N5C8 712 aaPredicted RBP19.28■□□□□ 0.68
ATXN2-227ENST00000616825 BCAS4Q8TDM0 211 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 ANKRD36BP1Q96IX9 119 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 HEG1Q9ULI3 1381 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 USP17L8P0C7I0 530 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 CDC25AP30304 524 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 PDE1BQ01064 536 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 ZNF653Q96CK0 615 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 PLEKHG1Q9ULL1 1385 aa19.28■□□□□ 0.68
ATXN2-227ENST00000616825 ARHGAP42A6NI28 874 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 SH2B2O14492 632 aaPredicted RBP19.27■□□□□ 0.68
ATXN2-227ENST00000616825 PRPF3O43395 683 aaKnown RBP19.27■□□□□ 0.68
ATXN2-227ENST00000616825 FAM182BQ5T319 152 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 RIPOR2Q9Y4F9 1068 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 ZNF853P0CG23 659 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 CCNE1P24864 410 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 ABCD1P33897 745 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 CCDC93Q567U6 631 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 ZNF658Q5TYW1 1059 aaPredicted RBP19.27■□□□□ 0.68
ATXN2-227ENST00000616825 PPP1R2P3Q6NXS1 205 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 C4orf50Q6ZRC1 276 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 SMYD4Q8IYR2 804 aaPredicted RBP19.27■□□□□ 0.68
ATXN2-227ENST00000616825 SH2D4BQ5SQS7 431 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 EP400NLQ6ZTU2 488 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 SLC35F6Q8N357 371 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 SCYL1Q96KG9 808 aa19.27■□□□□ 0.68
ATXN2-227ENST00000616825 TFAMQ00059 246 aaKnown RBP19.27■□□□□ 0.67
ATXN2-227ENST00000616825 NXNQ6DKJ4 435 aa19.27■□□□□ 0.67
ATXN2-227ENST00000616825 DGKHQ86XP1 1220 aa19.27■□□□□ 0.67
ATXN2-227ENST00000616825 TTLL11Q8NHH1 800 aa19.27■□□□□ 0.67
ATXN2-227ENST00000616825 ENOX1Q8TC92 643 aaKnown RBP19.27■□□□□ 0.67
ATXN2-227ENST00000616825 CACTINQ8WUQ7 758 aaKnown RBP19.27■□□□□ 0.67
ATXN2-227ENST00000616825 GPC4O75487 556 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 OSBPP22059 807 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 MAPK4P31152 587 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 IRX4P78413 519 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 PGBD1Q96JS3 809 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.26■□□□□ 0.67
ATXN2-227ENST00000616825 DAAM1Q9Y4D1 1078 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 RASGRF1Q13972 1273 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 MIS18BP1Q6P0N0 1132 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 KRT27Q7Z3Y8 459 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 PIGBQ92521 554 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 VCX3AQ9NNX9 186 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 EMILIN3Q9NT22 766 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 CFAP43Q8NDM7 1665 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 HIP1RO75146 1068 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 LRRN2O75325 713 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 SAT1P21673 171 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 SYDE2Q5VT97 1194 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 TTBK2Q6IQ55 1244 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 CLEC4GQ6UXB4 293 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 FAM160B2Q86V87 743 aa19.26■□□□□ 0.67
ATXN2-227ENST00000616825 IPO11Q9UI26 975 aaKnown RBP19.26■□□□□ 0.67
ATXN2-227ENST00000616825 INHBAP08476 426 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 GARSP41250 739 aaKnown RBP19.25■□□□□ 0.67
ATXN2-227ENST00000616825 MXI1P50539 228 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
ATXN2-227ENST00000616825 SEPT2Q15019 361 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 PARVGQ9HBI0 331 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 USH1CQ9Y6N9 552 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 GOLGA8CPA6NN73 597 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 CLIC2O15247 247 aa19.25■□□□□ 0.67
ATXN2-227ENST00000616825 HOXA7P31268 230 aaPredicted RBP19.25■□□□□ 0.67
ATXN2-227ENST00000616825 CCDC170Q8IYT3 715 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms