RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 PHF20Q9BVI0 1012 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 FAM204AQ9H8W3 233 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 BARHL2Q9NY43 387 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 LIMA1Q9UHB6 759 aaKnown RBP9.73□□□□□ -0.85
PCDH15-229ENST00000616114 AGTPBP1Q9UPW5 1226 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 ITIH6Q6UXX5 1313 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 E7EVH7 732 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 PLA2G4BP0C869 781 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 SCNN1DP51172 638 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 SBK1Q52WX2 424 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 FYB2Q5VWT5 728 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 FBXL16Q8N461 479 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 DCAF4Q8WV16 495 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 CALR3Q96L12 384 aaKnown RBP9.73□□□□□ -0.85
PCDH15-229ENST00000616114 NACC1Q96RE7 527 aa9.73□□□□□ -0.85
PCDH15-229ENST00000616114 IFT172Q9UG01 1749 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 RGS16O15492 202 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 PPIP5K2O43314 1243 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 MAN1A1P33908 653 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 EHHADHQ08426 723 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 MAPK8IP2Q13387 824 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 ALCAMQ13740 583 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 PPP1R2P3Q6NXS1 205 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 KAZALD1Q96I82 304 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 AS3MTQ9HBK9 375 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 GDAQ9Y2T3 454 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 A0A1B0GTH6 734 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 MYL7Q01449 175 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 GUCY2DQ02846 1103 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 CASP8Q14790 479 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 TERF2Q15554 542 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 GNPTABQ3T906 1256 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 LRCH2Q5VUJ6 765 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 EMBQ6PCB8 327 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 FOXP4Q8IVH2 680 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 WHAMMQ8TF30 809 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 EDEM3Q9BZQ6 932 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 HOMER3Q9NSC5 361 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 TYW1Q9NV66 732 aaKnown RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 CC2D1AQ6P1N0 951 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 NIM1KQ8IY84 436 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 FAM186BQ8IYM0 893 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 SH3RF3Q8TEJ3 882 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 GDAP1L1Q96MZ0 367 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 SMC6Q96SB8 1091 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 FUCA2Q9BTY2 467 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 PI4KBQ9UBF8 816 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 PGRMC1O00264 195 aaKnown RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 RNF40O75150 1001 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 IBSPP21815 317 aaPredicted RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 CDC25AP30304 524 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 PRCPP42785 496 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 BPIFB4P59827 614 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 ZYXQ15942 572 aaKnown RBP9.72□□□□□ -0.85
PCDH15-229ENST00000616114 PTPN21Q16825 1174 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 MAEAQ7L5Y9 396 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 TMEM206Q9H813 350 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 CEP72Q9P209 647 aa9.72□□□□□ -0.85
PCDH15-229ENST00000616114 ADRA2BP18089 450 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 PDE6CP51160 858 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 DHX37Q8IY37 1157 aaKnown RBP9.71□□□□□ -0.85
PCDH15-229ENST00000616114 RUBCNQ92622 972 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 P3H4Q92791 437 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 COA7Q96BR5 231 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 MRFAP1Q9Y605 127 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 MROH7-TTC4A0A0A0MT08 1334 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 SLC26A4O43511 780 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 MFAP3P55082 362 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 SF3B3Q15393 1217 aaKnown RBP9.71□□□□□ -0.85
PCDH15-229ENST00000616114 DOK7Q18PE1 504 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 ANKRD7Q92527 254 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 ZBTB9Q96C00 473 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 TRIM11Q96F44 468 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 KRT12Q99456 494 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 MAP3K14Q99558 947 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 ABCB6Q9NP58 842 aa9.71□□□□□ -0.85
PCDH15-229ENST00000616114 DIS3Q9Y2L1 958 aaKnown RBP9.71□□□□□ -0.85
PCDH15-229ENST00000616114 CTIFO43310 598 aaKnown RBP9.71□□□□□ -0.86
PCDH15-229ENST00000616114 BMP3P12645 472 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 ABCB4P21439 1286 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 PABPC4Q13310 644 aaKnown RBP eCLIP9.71□□□□□ -0.868e-9■■■■■ 38
PCDH15-229ENST00000616114 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 CCDC14Q49A88 953 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 ODR4Q5SWX8 454 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 SYDE2Q5VT97 1194 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 CEP57Q86XR8 500 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 BCAS4Q8TDM0 211 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 RSRC1Q96IZ7 334 aaKnown RBP9.71□□□□□ -0.86
PCDH15-229ENST00000616114 FAM84BQ96KN1 310 aaPredicted RBP9.71□□□□□ -0.86
PCDH15-229ENST00000616114 SP4Q02446 784 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 LRRC41Q15345 812 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 DCUN1D2Q6PH85 259 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 NSMFQ6X4W1 530 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 KIAA0825Q8IV33 1275 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 CPXCR1Q8N123 301 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 RAD54LQ92698 747 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 ACCSQ96QU6 501 aa9.71□□□□□ -0.86
PCDH15-229ENST00000616114 CCSER1Q9C0I3 900 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms