RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 IFT122Q9HBG6 1241 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 FRMPD2Q68DX3 1309 aaPredicted RBP20.47■□□□□ 0.87
SPAST-203ENST00000615843 TRIM66O15016 1216 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 YWHAEP62258 255 aaKnown RBP20.47■□□□□ 0.87
SPAST-203ENST00000615843 CDAN1Q8IWY9 1227 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 BCAMP50895 628 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 PROSER3Q2NL68 480 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 PUS3Q9BZE2 481 aaKnown RBP20.47■□□□□ 0.87
SPAST-203ENST00000615843 ANKRD20A4Q4UJ75 823 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 ANKRD20A8PQ5CZ79 823 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 ANKRD20A2Q5SQ80 823 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 ANKRD20A1Q5TYW2 823 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 ZNF653Q96CK0 615 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 CENPKQ9BS16 269 aa20.47■□□□□ 0.87
SPAST-203ENST00000615843 LOC102724159A0A0B4J2E5 919 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 PLEKHG3A1L390 1219 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 CIAO1O76071 339 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 TMED1Q13445 227 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 PWP2Q15269 919 aaKnown RBP20.46■□□□□ 0.87
SPAST-203ENST00000615843 TTLL7Q6ZT98 887 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 HAUS1Q96CS2 278 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 BEND6Q5SZJ8 279 aaPredicted RBP20.46■□□□□ 0.87
SPAST-203ENST00000615843 LRRC43Q8N309 656 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 OSBP2Q969R2 916 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 CCDC127Q96BQ5 260 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 AFG3L2Q9Y4W6 797 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 ESRRAP11474 423 aaPredicted RBP20.46■□□□□ 0.87
SPAST-203ENST00000615843 PHKA1P46020 1223 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 PPM1FP49593 454 aaPredicted RBP20.46■□□□□ 0.87
SPAST-203ENST00000615843 ASPHQ12797 758 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 ST13P4Q8IZP2 240 aaPredicted RBP20.46■□□□□ 0.87
SPAST-203ENST00000615843 COG1Q8WTW3 980 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 MAD1L1Q9Y6D9 718 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 ESRRGP62508 458 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
SPAST-203ENST00000615843 XAB2Q9HCS7 855 aaKnown RBP20.46■□□□□ 0.87
SPAST-203ENST00000615843 GGA1Q9UJY5 639 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 TRPC6Q9Y210 931 aa20.46■□□□□ 0.87
SPAST-203ENST00000615843 MSH2P43246 934 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 PROCA1Q8NCQ7 364 aaPredicted RBP20.45■□□□□ 0.86
SPAST-203ENST00000615843 RBM17Q96I25 401 aaKnown RBP20.45■□□□□ 0.86
SPAST-203ENST00000615843 WDR24Q96S15 920 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 KLC4Q9NSK0 619 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 INTUQ9ULD6 942 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.45■□□□□ 0.86
SPAST-203ENST00000615843 AATKQ6ZMQ8 1374 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 SGK1O00141 431 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 GFPT2O94808 682 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 LMNAP02545 664 aaKnown RBP20.45■□□□□ 0.86
SPAST-203ENST00000615843 ZYXQ15942 572 aaKnown RBP20.45■□□□□ 0.86
SPAST-203ENST00000615843 STK17AQ9UEE5 414 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 EXOC1LA0A1B0GW35 172 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 RNF8O76064 485 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 NCAPGQ9BPX3 1015 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 MAPK4P31152 587 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 MYO1EQ12965 1108 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 PDZD8Q8NEN9 1154 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 VTI1AQ96AJ9 217 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 ADAMTS1Q9UHI8 967 aa20.45■□□□□ 0.86
SPAST-203ENST00000615843 H0Y3Z8 333 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 MGEA5O60502 916 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 TRPA1O75762 1119 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 MFAP3P55082 362 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 MMEL1Q495T6 779 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 FAM102BQ5T8I3 360 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 SCYL2Q6P3W7 929 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 CCDC125Q86Z20 511 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 CXorf38Q8TB03 319 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 SPDL1Q96EA4 605 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 PSMC2P35998 433 aaKnown RBP20.44■□□□□ 0.86
SPAST-203ENST00000615843 VSNL1P62760 191 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 LLGL1Q15334 1064 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 ZC3H18Q86VM9 953 aaKnown RBP20.44■□□□□ 0.86
SPAST-203ENST00000615843 LRGUKQ96M69 825 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 PITPNM3Q9BZ71 974 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 KCNG1Q9UIX4 513 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 LGALS16A8MUM7 142 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 DCTN3O75935 186 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 GYG1P46976 350 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 MAGOHP61326 146 aaKnown RBP20.44■□□□□ 0.86
SPAST-203ENST00000615843 SATB1Q01826 763 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 FAM186BQ8IYM0 893 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 ZBTB38Q8NAP3 1195 aaPredicted RBP20.44■□□□□ 0.86
SPAST-203ENST00000615843 CDKL2Q92772 493 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 SCYL1Q96KG9 808 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 TBX22Q9Y458 520 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 TTLL3Q9Y4R7 772 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 CTIFO43310 598 aaKnown RBP20.44■□□□□ 0.86
SPAST-203ENST00000615843 PALMO75781 387 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 PCCAP05165 728 aaPredicted RBP20.44■□□□□ 0.86
SPAST-203ENST00000615843 DLATP10515 647 aaKnown RBP20.44■□□□□ 0.86
SPAST-203ENST00000615843 PTPREP23469 700 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 PPP2R2AP63151 447 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 AOC3Q16853 763 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 KAT6BQ8WYB5 2073 aa20.44■□□□□ 0.86
SPAST-203ENST00000615843 PRPF6O94906 941 aaKnown RBP20.43■□□□□ 0.86
SPAST-203ENST00000615843 CA4P22748 312 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 CCZ1BP86790 482 aa20.43■□□□□ 0.86
SPAST-203ENST00000615843 CCZ1P86791 482 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms