RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 CDR2LQ86X02 465 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 KCTD17Q8N5Z5 321 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 MLKLQ8NB16 471 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 AIPL1Q9NZN9 384 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 KLF18A0A0U1RQI7 1052 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 HOXC9P31274 260 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 BFSP1Q12934 665 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 NUP58Q9BVL2 599 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 TRIM75PA6NK02 468 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 MAN1A1P33908 653 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 TBL3Q12788 808 aaKnown RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 FCHSD1Q86WN1 690 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 GLI2P10070 1586 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 HSPA9P38646 679 aaKnown RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 STRN3Q13033 797 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 IGSF22Q8N9C0 903 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 CCDC51Q96ER9 411 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 ZFYVE19Q96K21 471 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 PPP2R5CQ13362 524 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 ANKARQ7Z5J8 1434 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 EYA1Q99502 592 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 INTS9Q9NV88 658 aaKnown RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 SEC24BO95487 1268 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 PLCG2P16885 1265 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 GARSP41250 739 aaKnown RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 EIF3CQ99613 913 aaKnown RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 CDCA7Q9BWT1 371 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-211ENST00000615798 NDE1Q9NXR1 346 aa10.04□□□□□ -0.8
COL12A1-211ENST00000615798 SLFN14P0C7P3 912 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 SERPINB3P29508 390 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 RUNDC3AQ59EK9 446 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 ARHGAP22Q7Z5H3 698 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 CCDC117Q8IWD4 279 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 RNASE11Q8TAA1 199 aaKnown RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 KLC2Q9H0B6 622 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 RIC8AQ9NPQ8 531 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 MSH2P43246 934 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 NOSTRINQ8IVI9 506 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 MRGBPQ9NV56 204 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 KIF17Q9P2E2 1029 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 ABCA9Q8IUA7 1624 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 GOLGA8CPA6NN73 597 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 DLGAP3O95886 979 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 CASP2P42575 452 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 ASPHQ12797 758 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 TMTC1Q8IUR5 882 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 IFIH1Q9BYX4 1025 aaKnown RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 ANTXR1Q9H6X2 564 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 MKNK2Q9HBH9 465 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 CDC25BP30305 580 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 KRT72Q14CN4 511 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 RTN1Q16799 776 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 SKAP1Q86WV1 359 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 FBXL13Q8NEE6 735 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 PLBD2Q8NHP8 589 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 RUNDC3BQ96NL0 473 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 CARD9Q9H257 536 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 ATPIF1Q9UII2 106 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 EIF2B2P49770 351 aaKnown RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 TSPYL6Q8N831 410 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 IQUBQ8NA54 791 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 OLFML3Q9NRN5 406 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 IQGAP1P46940 1657 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 GOLGA8JA6NMD2 632 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 GOLGA8TH3BQL2 631 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 ZNF75DP51815 510 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 OLR1P78380 273 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 RARS2Q5T160 578 aaKnown RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 MTBPQ96DY7 904 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 GPR108Q9NPR9 543 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 DDHD2O94830 711 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 PCP11498 1178 aaKnown RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 RABGGTAQ92696 567 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 LRRC39Q96DD0 335 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 TRIM31Q9BZY9 425 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 PTPDC1A2A3K4 754 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 ASIC2Q16515 512 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 HIBCHQ6NVY1 386 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 BZW1Q7L1Q6 419 aaKnown RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 ZNF274Q96GC6 653 aaPredicted RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 XPO1O14980 1071 aaKnown RBP10.03□□□□□ -0.8
COL12A1-211ENST00000615798 S100A1P23297 94 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 SLFNL1Q499Z3 407 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 EP400NLQ6ZTU2 488 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 KRT28Q7Z3Y7 464 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 FBXO18Q8NFZ0 1043 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
COL12A1-211ENST00000615798 HDAC11Q96DB2 347 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 USP32Q8NFA0 1604 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 E9PCH4 1651 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 ASIC1P78348 528 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 ZNF444Q8N0Y2 327 aaPredicted RBP10.02□□□□□ -0.8
COL12A1-211ENST00000615798 TRIM45Q9H8W5 580 aaPredicted RBP10.02□□□□□ -0.8
COL12A1-211ENST00000615798 GUCY1B3Q02153 619 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 RPS6KA1Q15418 735 aa10.02□□□□□ -0.8
COL12A1-211ENST00000615798 ALS2CLQ60I27 953 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms