RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 TBCKQ8TEA7 893 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 CRYGNQ8WXF5 182 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 HTATIP2Q9BUP3 242 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 MROH8Q9H579 483 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 ACAD9Q9H845 621 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 A1CFQ9NQ94 594 aaKnown RBP9.17□□□□□ -0.94
PCDH9-205ENST00000614931 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.17□□□□□ -0.94
PCDH9-205ENST00000614931 FLRT1Q9NZU1 646 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 OGDHLQ9ULD0 1010 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 MRVI1Q9Y6F6 885 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 ASTN1O14525 1302 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 FRMPD4Q14CM0 1322 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 H0YGN5 161 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 GCOM1H8Y6P7 765 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-205ENST00000614931 POLR2MP0CAP2 368 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 NCLP19338 710 aaKnown RBP9.16□□□□□ -0.94
PCDH9-205ENST00000614931 ERCC3P19447 782 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 CCND3P30281 292 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-205ENST00000614931 NASPP49321 788 aaPredicted RBP9.16□□□□□ -0.94
PCDH9-205ENST00000614931 RPS6P62753 249 aaKnown RBP9.16□□□□□ -0.94
PCDH9-205ENST00000614931 TRAF1Q13077 416 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 AP3B2Q13367 1082 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 SF3A1Q15459 793 aaKnown RBP9.16□□□□□ -0.94
PCDH9-205ENST00000614931 TTC38Q5R3I4 469 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 ANO1Q5XXA6 986 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 LHX8Q68G74 356 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 ABRAQ8N0Z2 381 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 DPF3Q92784 378 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 TAAR1Q96RJ0 339 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 GLT8D2Q9H1C3 349 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 POLR3EQ9NVU0 708 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 CYP39A1Q9NYL5 469 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 RTEL1Q9NZ71 1219 aa9.16□□□□□ -0.94
PCDH9-205ENST00000614931 DDX49Q9Y6V7 483 aaKnown RBP9.16□□□□□ -0.94
PCDH9-205ENST00000614931 COBLO75128 1261 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 GADD45BO75293 160 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-205ENST00000614931 TDP2O95551 362 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 SLC25A27O95847 323 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 ADORA2AP29274 412 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 MCM4P33991 863 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 SREBF1P36956 1147 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 KRT85P78386 507 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 ARHGAP4P98171 946 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 BAATQ14032 418 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-205ENST00000614931 NFKBIBQ15653 356 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 ZNF174Q15697 407 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 RILPL1Q5EBL4 403 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 MFSD14CQ5VZR4 134 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 OLFML2BQ68BL8 750 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 RNF207Q6ZRF8 634 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 NECAB2Q7Z6G3 386 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 NEK8Q86SG6 692 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 DPP9Q86TI2 863 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 NCAPG2Q86XI2 1143 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 MCF2L2Q86YR7 1114 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 C4orf32Q8N8J7 132 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 TMEM87AQ8NBN3 555 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 LINC00301Q8NCQ3 95 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 DIS3LQ8TF46 1054 aaKnown RBP9.15□□□□□ -0.94
PCDH9-205ENST00000614931 LEO1Q8WVC0 666 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-205ENST00000614931 PAWRQ96IZ0 340 aaKnown RBP9.15□□□□□ -0.94
PCDH9-205ENST00000614931 ZFP91Q96JP5 570 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-205ENST00000614931 FGD4Q96M96 766 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 ZNF396Q96N95 335 aaPredicted RBP9.15□□□□□ -0.94
PCDH9-205ENST00000614931 GBP4Q96PP9 640 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 TMEM60Q9H2L4 133 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 LMBRD1Q9NUN5 540 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 PNMA2Q9UL42 364 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 NOL7Q9UMY1 257 aaKnown RBP9.15□□□□□ -0.94
PCDH9-205ENST00000614931 ATP6V1DQ9Y5K8 247 aa9.15□□□□□ -0.94
PCDH9-205ENST00000614931 SOWAHBA6NEL2 793 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 SPDYE3A6NKU9 549 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 SLC37A4O43826 429 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 YEATS4O95619 227 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 FOSP01100 380 aaPredicted RBP9.14□□□□□ -0.95
PCDH9-205ENST00000614931 FCER1AP12319 257 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 MCM7P33993 719 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 TRAPPC10P48553 1259 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 CNTN2Q02246 1040 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 GRIN1Q05586 938 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 LETM2Q2VYF4 491 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 HABP4Q5JVS0 413 aaKnown RBP9.14□□□□□ -0.95
PCDH9-205ENST00000614931 POTEDQ86YR6 584 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 SAMD3Q8N6K7 520 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 MBOAT7Q96N66 472 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 PXMP2Q9NR77 195 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 SLC5A4Q9NY91 659 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 RCOR1Q9UKL0 485 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 NR2E3Q9Y5X4 410 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 FRMPD3Q5JV73 1810 aa9.14□□□□□ -0.95
PCDH9-205ENST00000614931 ALPK3Q96L96 1907 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 DNAJC25-GNG10A0A024R161 153 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 IGLV3-22A0A075B6J6 115 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 PGK2P07205 417 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 CYP3A4P08684 503 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 COL6A1P12109 1028 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 CYBAP13498 195 aa9.13□□□□□ -0.95
PCDH9-205ENST00000614931 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
PCDH9-205ENST00000614931 MARCKSP29966 332 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms