RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 ZMYND8Q9ULU4 1186 aaPredicted RBP20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 ATP11BQ9Y2G3 1177 aa20.79■□□□□ 0.92
SEMA3B-211ENST00000612509 ZEB2O60315 1214 aa20.78■□□□□ 0.92
SEMA3B-211ENST00000612509 SCG2P13521 617 aa20.78■□□□□ 0.92
SEMA3B-211ENST00000612509 VSIG10LQ86VR7 867 aa20.78■□□□□ 0.92
SEMA3B-211ENST00000612509 PHKBQ93100 1093 aa20.78■□□□□ 0.92
SEMA3B-211ENST00000612509 ZNF274Q96GC6 653 aaPredicted RBP20.78■□□□□ 0.92
SEMA3B-211ENST00000612509 BARHL2Q9NY43 387 aa20.78■□□□□ 0.92
SEMA3B-211ENST00000612509 MRVI1Q9Y6F6 885 aa20.78■□□□□ 0.92
SEMA3B-211ENST00000612509 LTBP2Q14767 1821 aa20.78■□□□□ 0.92
SEMA3B-211ENST00000612509 PRPF3O43395 683 aaKnown RBP20.77■□□□□ 0.92
SEMA3B-211ENST00000612509 RGS20O76081 388 aa20.77■□□□□ 0.92
SEMA3B-211ENST00000612509 IFNAR1P17181 557 aa20.77■□□□□ 0.92
SEMA3B-211ENST00000612509 SYN1P17600 705 aa20.77■□□□□ 0.92
SEMA3B-211ENST00000612509 CPT1AP50416 773 aa20.77■□□□□ 0.92
SEMA3B-211ENST00000612509 RNF26Q9BY78 433 aaPredicted RBP20.77■□□□□ 0.92
SEMA3B-211ENST00000612509 ELP1O95163 1332 aa20.77■□□□□ 0.91
SEMA3B-211ENST00000612509 ADCY7P51828 1080 aa20.76■□□□□ 0.91
SEMA3B-211ENST00000612509 STK3Q13188 491 aa20.76■□□□□ 0.91
SEMA3B-211ENST00000612509 LY6KQ17RY6 165 aa20.76■□□□□ 0.91
SEMA3B-211ENST00000612509 CXCL17Q6UXB2 119 aa20.76■□□□□ 0.91
SEMA3B-211ENST00000612509 SLC26A6Q9BXS9 759 aa20.76■□□□□ 0.91
SEMA3B-211ENST00000612509 ALDH8A1Q9H2A2 487 aaPredicted RBP20.76■□□□□ 0.91
SEMA3B-211ENST00000612509 RIC8AQ9NPQ8 531 aa20.76■□□□□ 0.91
SEMA3B-211ENST00000612509 DDX41Q9UJV9 622 aaKnown RBP20.76■□□□□ 0.91
SEMA3B-211ENST00000612509 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 SPDYE3A6NKU9 549 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 PPFIA3O75145 1194 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 STAM2O75886 525 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 CABYRO75952 493 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 GH1P01241 217 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 AK2P54819 239 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 MRPS9P82933 396 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 AKAP17AQ02040 695 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 ARHGAP1Q07960 439 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 PKN1Q16512 942 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 PCNX4Q63HM2 1172 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 TEX2Q8IWB9 1127 aa20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 ZFP91Q96JP5 570 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-211ENST00000612509 SCN10AQ9Y5Y9 1956 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 PQBP1O60828 265 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 ANKRD1Q15327 319 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 GNPTABQ3T906 1256 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 BRDTQ58F21 947 aaPredicted RBP20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 CHRDL2Q6WN34 429 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 VTI1AQ96AJ9 217 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 INPP4AQ96PE3 977 aaPredicted RBP20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 PDLIM7Q9NR12 457 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 POLR3EQ9NVU0 708 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 PCDH10Q9P2E7 1040 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 TPCN1Q9ULQ1 816 aa20.74■□□□□ 0.91
SEMA3B-211ENST00000612509 ESYT2A0FGR8 921 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 SMCO2A6NFE2 343 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 A6NJR5 290 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 CPLX1O14810 134 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 UBA1P22314 1058 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 PURAQ00577 322 aaKnown RBP20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 TLE2Q04725 743 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 SCRN1Q12765 414 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 XRRA1Q6P2D8 792 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 KCNV1Q6PIU1 500 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 ANKRD33Q7Z3H0 272 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 CCDC12Q8WUD4 166 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 EMID1Q96A84 441 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 GLT8D2Q9H1C3 349 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 EHMT1Q9H9B1 1298 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 PRDM5Q9NQX1 630 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 PCDHA6Q9UN73 950 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 PCDHA8Q9Y5H6 950 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 DNAH12Q6ZR08 3092 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 MROH7Q68CQ1 1323 aa20.73■□□□□ 0.91
SEMA3B-211ENST00000612509 MYH7BA7E2Y1 1941 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 ARVCFO00192 962 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 MMP3P08254 477 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 MYL3P08590 195 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 AP3B2Q13367 1082 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 CPLX2Q6PUV4 134 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 TRIM22Q8IYM9 498 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 AFG1LQ8WV93 481 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 PGBD1Q96JS3 809 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 ANO3Q9BYT9 981 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 SLKQ9H2G2 1235 aaPredicted RBP20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 RTEL1Q9NZ71 1219 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 PRKAG2Q9UGJ0 569 aa20.72■□□□□ 0.91
SEMA3B-211ENST00000612509 DOCK5Q9H7D0 1870 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 PFKFB2O60825 505 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 CLTBP09497 229 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 ICAM3P32942 547 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 CLK2P49760 499 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 NEK4P51957 841 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 PSMC6P62333 389 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 SEMA3FQ13275 785 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 CCDC148Q8NFR7 591 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 TOX2Q96NM4 488 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 MTG1Q9BT17 334 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 ZMYND12Q9H0C1 365 aa20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 COLQQ9Y215 455 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-211ENST00000612509 FIBPO43427 364 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 GGPS1O95749 300 aa20.7■□□□□ 0.9
SEMA3B-211ENST00000612509 FOSP01100 380 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms