RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 ZEB2O60315 1214 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 TNFRSF8P28908 595 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 TRADDQ15628 312 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 HGSNATQ68CP4 663 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 PDXDC1Q6P996 788 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 ACSBG1Q96GR2 724 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 EPB41L5Q9HCM4 733 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 NLRC4Q9NPP4 1024 aa16.74■□□□□ 0.27
PCDHGB1-202ENST00000611598 LAMB2P55268 1798 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 HEXIM1O94992 359 aaKnown RBP16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 FTCDO95954 541 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 GNAQP50148 359 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 GUCY2FP51841 1108 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 AMPD3Q01432 767 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 GUCY2DQ02846 1103 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 GRB10Q13322 594 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 NONOQ15233 471 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 LRRC41Q15345 812 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 GALNT17Q6IS24 598 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 KCNV1Q6PIU1 500 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 SUGP1Q8IWZ8 645 aaKnown RBP16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 RNPC3Q96LT9 517 aaKnown RBP16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 NOX5Q96PH1 765 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 TMEM47Q9BQJ4 181 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 ZMYND12Q9H0C1 365 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 MKNK2Q9HBH9 465 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 MYH14Q7Z406 1995 aaKnown RBP16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 INPP5BP32019 993 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 PPP1R2P41236 205 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 TXKP42681 527 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 COBLL1Q53SF7 1204 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 PIK3R5Q8WYR1 880 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 IQCDQ96DY2 449 aa16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 PACSIN2Q9UNF0 486 aaPredicted RBP16.73■□□□□ 0.27
PCDHGB1-202ENST00000611598 PALM3A6NDB9 673 aaPredicted RBP16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 SMCO2A6NFE2 343 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 KLRF2D3W0D1 207 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 TSPY3P0CV98 308 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 TSPY8P0CW00 308 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 RNASE9P60153 205 aaKnown RBP16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 GUCY1A3Q02108 690 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 KCNMA1Q12791 1236 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 SV2BQ7L1I2 683 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 CACNA2D4Q7Z3S7 1137 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 NEK8Q86SG6 692 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 CCDC84Q86UT8 332 aaPredicted RBP16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 TXNRD3Q86VQ6 643 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 IQCKQ8N0W5 287 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 TBCKQ8TEA7 893 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 ANKS1AQ92625 1134 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 GDF3Q9NR23 364 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 TLR2O60603 784 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 PALMO75781 387 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 HIBADHP31937 336 aaKnown RBP16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 SIK1P57059 783 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 CFAP221Q4G0U5 840 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 KRT25Q7Z3Z0 450 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 CALML4Q96GE6 196 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 PNMA5Q96PV4 448 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 TANGO6Q9C0B7 1094 aa16.72■□□□□ 0.27
PCDHGB1-202ENST00000611598 HNRNPH1P31943 449 aaKnown RBP16.71■□□□□ 0.27
PCDHGB1-202ENST00000611598 SF3B3Q15393 1217 aaKnown RBP16.71■□□□□ 0.27
PCDHGB1-202ENST00000611598 CFAP58Q5T655 872 aa16.71■□□□□ 0.27
PCDHGB1-202ENST00000611598 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
PCDHGB1-202ENST00000611598 IFT20Q8IY31 132 aa16.71■□□□□ 0.27
PCDHGB1-202ENST00000611598 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.27
PCDHGB1-202ENST00000611598 TMEM260Q9NX78 707 aa16.71■□□□□ 0.27
PCDHGB1-202ENST00000611598 BIN2Q9UBW5 565 aaPredicted RBP16.71■□□□□ 0.27
PCDHGB1-202ENST00000611598 PPARDQ03181 441 aa16.71■□□□□ 0.26
PCDHGB1-202ENST00000611598 UNC13DQ70J99 1090 aa16.71■□□□□ 0.26
PCDHGB1-202ENST00000611598 DZIP1Q86YF9 867 aaKnown RBP16.71■□□□□ 0.26
PCDHGB1-202ENST00000611598 CASKIN2Q8WXE0 1202 aa16.71■□□□□ 0.26
PCDHGB1-202ENST00000611598 KRT12Q99456 494 aa16.71■□□□□ 0.26
PCDHGB1-202ENST00000611598 DOT1LQ8TEK3 1739 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 LSP1P33241 339 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 KCTD19Q17RG1 926 aaPredicted RBP16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 NUDT12Q9BQG2 462 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 KANSL2Q9H9L4 492 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 VAT1LQ9HCJ6 419 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 POTEMA6NI47 508 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 KLRC1P26715 233 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 GLE1Q53GS7 698 aaKnown RBP16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 MCTP2Q6DN12 878 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 USP17L2Q6R6M4 530 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 SMIM5Q71RC9 77 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 KCNK18Q7Z418 384 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 SLC51AQ86UW1 340 aa16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 LARP4BQ92615 738 aaKnown RBP16.7■□□□□ 0.26
PCDHGB1-202ENST00000611598 SSU72P8A0A1W2PR75 194 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 NOL4O94818 638 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 KDM7AQ6ZMT4 941 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 CAPN7Q9Y6W3 813 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 MYO1FO00160 1098 aa16.69■□□□□ 0.26
PCDHGB1-202ENST00000611598 SLC37A4O43826 429 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms