RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 ERGIC2Q96RQ1 377 aa26.54■■□□□ 1.84
HOXA4-204ENST00000610970 TDRD3Q9H7E2 651 aaKnown RBP26.54■■□□□ 1.84
HOXA4-204ENST00000610970 MRFAP1Q9Y605 127 aa26.54■■□□□ 1.84
HOXA4-204ENST00000610970 TTC26A0AVF1 554 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 FAM196BA6NMK8 535 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 TBC1D8BQ0IIM8 1120 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 FKBP15Q5T1M5 1219 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 SYDE2Q5VT97 1194 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 FBXO11Q86XK2 927 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 DDX12PQ92771 950 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 SEMA6BQ9H3T3 888 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 SLC39A2Q9NP94 309 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 A0A1W2PQJ5 194 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 PPIP5K2O43314 1243 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 BMP3P12645 472 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 ARHGAP29Q52LW3 1261 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 TSG101Q99816 390 aa26.53■■□□□ 1.84
HOXA4-204ENST00000610970 NOC4LQ9BVI4 516 aaKnown RBP26.53■■□□□ 1.84
HOXA4-204ENST00000610970 ZNF219Q9P2Y4 722 aaPredicted RBP26.53■■□□□ 1.84
HOXA4-204ENST00000610970 RNF225M0QZC1 329 aaPredicted RBP26.52■■□□□ 1.84
HOXA4-204ENST00000610970 PES1O00541 588 aaKnown RBP26.52■■□□□ 1.84
HOXA4-204ENST00000610970 MEIS2O14770 477 aa26.52■■□□□ 1.84
HOXA4-204ENST00000610970 RAD21O60216 631 aa26.52■■□□□ 1.84
HOXA4-204ENST00000610970 TADA3O75528 432 aa26.52■■□□□ 1.84
HOXA4-204ENST00000610970 NDUFB10O96000 172 aa26.52■■□□□ 1.84
HOXA4-204ENST00000610970 ERCC6LQ2NKX8 1250 aa26.52■■□□□ 1.84
HOXA4-204ENST00000610970 CRYGNQ8WXF5 182 aa26.52■■□□□ 1.84
HOXA4-204ENST00000610970 NUDT12Q9BQG2 462 aa26.52■■□□□ 1.84
HOXA4-204ENST00000610970 OGFRQ9NZT2 677 aa26.52■■□□□ 1.84
HOXA4-204ENST00000610970 B4DLN1 442 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L15C9J2P7 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L13C9JLJ4 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L11C9JVI0 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L18D6R9N7 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L22D6RA61 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L17D6RBQ6 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L19D6RCP7 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L20D6RJB6 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 TUBB4BP68371 445 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L24Q0WX57 530 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 MEA1Q16626 185 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 Q4G0T1 1027 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 USP17L6PQ6QN14 398 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 RTKN2Q8IZC4 609 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 LZTFL1Q9NQ48 299 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 ZNHIT6Q9NWK9 470 aaKnown RBP26.51■■□□□ 1.83
HOXA4-204ENST00000610970 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.51■■□□□ 1.83
HOXA4-204ENST00000610970 EPN1Q9Y6I3 576 aaPredicted RBP26.51■■□□□ 1.83
HOXA4-204ENST00000610970 V9GYY5 206 aaPredicted RBP26.51■■□□□ 1.83
HOXA4-204ENST00000610970 SLURP2P0DP57 97 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 H2AFXP16104 143 aaPredicted RBP26.51■■□□□ 1.83
HOXA4-204ENST00000610970 ZBED6P86452 979 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 ZNF662Q6ZS27 426 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 DYMQ7RTS9 669 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 PRMT6Q96LA8 375 aaPredicted RBP26.51■■□□□ 1.83
HOXA4-204ENST00000610970 CARD6Q9BX69 1037 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 TTYH3Q9C0H2 523 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 VPS33BQ9H267 617 aa26.51■■□□□ 1.83
HOXA4-204ENST00000610970 KIF20AO95235 890 aa26.5■■□□□ 1.83
HOXA4-204ENST00000610970 CDK17Q00537 523 aa26.5■■□□□ 1.83
HOXA4-204ENST00000610970 MIIPQ5JXC2 388 aa26.5■■□□□ 1.83
HOXA4-204ENST00000610970 HAUS3Q68CZ6 603 aa26.5■■□□□ 1.83
HOXA4-204ENST00000610970 HDAC9Q9UKV0 1011 aa26.5■■□□□ 1.83
HOXA4-204ENST00000610970 YDJCA8MPS7 323 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 NDUFA10O95299 355 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 GDF11O95390 407 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 GH2P01242 217 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 IDEP14735 1019 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 ARHGAP4P98171 946 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 RSBN1LQ6PCB5 846 aaPredicted RBP26.49■■□□□ 1.83
HOXA4-204ENST00000610970 KCNK18Q7Z418 384 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 CCDC65Q8IXS2 484 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 KCTD17Q8N5Z5 321 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 ERMNQ8TAM6 284 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 DNAJC19Q96DA6 116 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 FAM20AQ96MK3 541 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 CSRNP1Q96S65 589 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 PSMD1Q99460 953 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 ARHGEF10LQ9HCE6 1279 aa26.49■■□□□ 1.83
HOXA4-204ENST00000610970 ARGLU1Q9NWB6 273 aaPredicted RBP26.49■■□□□ 1.83
HOXA4-204ENST00000610970 DDX41Q9UJV9 622 aaKnown RBP26.49■■□□□ 1.83
HOXA4-204ENST00000610970 TRIM21P19474 475 aaKnown RBP26.48■■□□□ 1.83
HOXA4-204ENST00000610970 SREBF1P36956 1147 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 KRT83P78385 493 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 PPP2R3AQ06190 1150 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 MAN2A1Q16706 1144 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 FBXO38Q6PIJ6 1188 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 CCDC170Q8IYT3 715 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 SPDYE3A6NKU9 549 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 CIITAP33076 1130 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 SHROOM1Q2M3G4 852 aaPredicted RBP26.48■■□□□ 1.83
HOXA4-204ENST00000610970 VWA3BQ502W6 1294 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 CCDC84Q86UT8 332 aaPredicted RBP26.48■■□□□ 1.83
HOXA4-204ENST00000610970 MYOCDQ8IZQ8 938 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 FAM151AQ8WW52 585 aa26.48■■□□□ 1.83
HOXA4-204ENST00000610970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.48■■□□□ 1.83
HOXA4-204ENST00000610970 SPDYE2BA6NHP3 402 aa26.47■■□□□ 1.83
HOXA4-204ENST00000610970 PIK3CDO00329 1044 aa26.47■■□□□ 1.83
HOXA4-204ENST00000610970 SPDYE6P0CI01 402 aa26.47■■□□□ 1.83
HOXA4-204ENST00000610970 CYLC1P35663 651 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms