RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 RNF41Q9H4P4 317 aaPredicted RBP8.53□□□□□ -1.04
LMBR1-221ENST00000609774 TDRD3Q9H7E2 651 aaKnown RBP8.53□□□□□ -1.04
LMBR1-221ENST00000609774 VIPAS39Q9H9C1 493 aa8.53□□□□□ -1.04
LMBR1-221ENST00000609774 BRMS1Q9HCU9 246 aa8.53□□□□□ -1.04
LMBR1-221ENST00000609774 ST7Q9NRC1 585 aa8.53□□□□□ -1.04
LMBR1-221ENST00000609774 SRPRBQ9Y5M8 271 aaKnown RBP8.53□□□□□ -1.04
LMBR1-221ENST00000609774 A6NNZ2 444 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 TMEM232C9JQI7 657 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 PDHXO00330 501 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 CXCL11O14625 94 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 SEC31AO94979 1220 aaKnown RBP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 DEXIO95424 95 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 MYCP01106 439 aaPredicted RBP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 MMP1P03956 469 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 ANTXR2P58335 489 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 MDM2Q00987 491 aaPredicted RBP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 PRKCZQ05513 592 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 IFIT5Q13325 482 aaKnown RBP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 UBE4AQ14139 1066 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 TUBB8Q3ZCM7 444 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 MFSD14BQ5SR56 506 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 TMED8Q6PL24 325 aaPredicted RBP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 CYP26C1Q6V0L0 522 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 RASGRP2Q7LDG7 609 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 TDHQ8IZJ6 230 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 IGSF22Q8N9C0 903 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 LRRN4CLQ8ND94 238 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 IPO4Q8TEX9 1081 aaKnown RBP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 DHX58Q96C10 678 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 ZDHHC15Q96MV8 337 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 GSDMAQ96QA5 445 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 PARK7Q99497 189 aaKnown RBP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 SLC26A6Q9BXS9 759 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 RMND1Q9NWS8 449 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 FEZ2Q9UHY8 353 aaPredicted RBP8.52□□□□□ -1.05
LMBR1-221ENST00000609774 ADAM21Q9UKJ8 722 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 SUGT1Q9Y2Z0 365 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 ADGRG1Q9Y653 693 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 PTPRFP10586 1907 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 SYNRGQ9UMZ2 1314 aa8.52□□□□□ -1.05
LMBR1-221ENST00000609774 SPTBN5Q9NRC6 3674 aaKnown RBP8.51□□□□□ -1.05
LMBR1-221ENST00000609774 ANKRD18BA2A2Z9 1011 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 F8W031 263 aaPredicted RBP8.51□□□□□ -1.05
LMBR1-221ENST00000609774 IFIT3O14879 490 aaKnown RBP8.51□□□□□ -1.05
LMBR1-221ENST00000609774 POLR2DO15514 142 aaKnown RBP8.51□□□□□ -1.05
LMBR1-221ENST00000609774 MFAP3LO75121 409 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 ADD2P35612 726 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 CRKP46108 304 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 ADKP55263 362 aaKnown RBP8.51□□□□□ -1.05
LMBR1-221ENST00000609774 RTN1Q16799 776 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 ZNF569Q5MCW4 686 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 DCAF15Q66K64 600 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 TOGARAM2Q6ZUX3 1019 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 NECAB2Q7Z6G3 386 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 NEK11Q8NG66 645 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 RUBCNQ92622 972 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 ZKSCAN4Q969J2 545 aaPredicted RBP8.51□□□□□ -1.05
LMBR1-221ENST00000609774 WDR24Q96S15 920 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 WRNIP1Q96S55 665 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 NBPF3Q9H094 633 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 PRDM6Q9NQX0 595 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 AATFQ9NY61 560 aaKnown RBP eCLIP8.51□□□□□ -1.05
LMBR1-221ENST00000609774 VPS18Q9P253 973 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 CPA4Q9UI42 421 aa8.51□□□□□ -1.05
LMBR1-221ENST00000609774 FBXO2Q9UK22 296 aaPredicted RBP8.51□□□□□ -1.05
LMBR1-221ENST00000609774 TRIM75PA6NK02 468 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 PATL2C9JE40 543 aaKnown RBP8.5□□□□□ -1.05
LMBR1-221ENST00000609774 SNAP23O00161 211 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 DPYSL4O14531 572 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 ADCY3O60266 1144 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 IPO7O95373 1038 aaKnown RBP8.5□□□□□ -1.05
LMBR1-221ENST00000609774 FECHP22830 423 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 ZAP70P43403 619 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 RBM5P52756 815 aaKnown RBP eCLIP8.5□□□□□ -1.05
LMBR1-221ENST00000609774 KRT83P78385 493 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 MAP3K12Q12852 859 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 WTAPQ15007 396 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 KARSQ15046 597 aaKnown RBP8.5□□□□□ -1.05
LMBR1-221ENST00000609774 LRRC24Q50LG9 513 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 METTL24Q5JXM2 366 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 BEND6Q5SZJ8 279 aaPredicted RBP8.5□□□□□ -1.05
LMBR1-221ENST00000609774 SLC9C2Q5TAH2 1124 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 WDR93Q6P2C0 686 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 MFSD6Q6ZSS7 791 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 SRLQ86TD4 932 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 MICU3Q86XE3 530 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 DIS3L2Q8IYB7 885 aaKnown RBP8.5□□□□□ -1.05
LMBR1-221ENST00000609774 SPATA20Q8TB22 786 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 TBC1D22AQ8WUA7 517 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 PPM1EQ8WY54 764 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 IQCDQ96DY2 449 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 FAM84BQ96KN1 310 aaPredicted RBP8.5□□□□□ -1.05
LMBR1-221ENST00000609774 CLIC6Q96NY7 704 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 ZNF341Q9BYN7 854 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 NAPBQ9H115 298 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 LZTFL1Q9NQ48 299 aa8.5□□□□□ -1.05
LMBR1-221ENST00000609774 SEPT9Q9UHD8 586 aaPredicted RBP8.5□□□□□ -1.05
LMBR1-221ENST00000609774 SERTAD1Q9UHV2 236 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms