RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CTAGE5O15320 804 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-209ENST00000609477 CDKL5O76039 1030 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 RBM25P49756 843 aaKnown RBP16.4■□□□□ 0.22
HDDC2-209ENST00000609477 CPT1AP50416 773 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
HDDC2-209ENST00000609477 FSCN1Q16658 493 aaKnown RBP16.4■□□□□ 0.22
HDDC2-209ENST00000609477 GNPTABQ3T906 1256 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 GPKOWQ92917 476 aaPredicted RBP eCLIP16.4■□□□□ 0.22
HDDC2-209ENST00000609477 LENG1Q96BZ8 264 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-209ENST00000609477 GLT1D1Q96MS3 346 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
HDDC2-209ENST00000609477 DNAH12Q6ZR08 3092 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 SMCO2A6NFE2 343 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 KPNA6O60684 536 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 PFKFB2O60825 505 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 ASGR1P07306 291 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 MYCLP12524 364 aaPredicted RBP16.39■□□□□ 0.21
HDDC2-209ENST00000609477 GNA11P29992 359 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 ADCY7P51828 1080 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 NEK4P51957 841 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 AK2P54819 239 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 CCDC148Q8NFR7 591 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 EMID1Q96A84 441 aaPredicted RBP16.39■□□□□ 0.21
HDDC2-209ENST00000609477 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 ZMYND12Q9H0C1 365 aa16.39■□□□□ 0.21
HDDC2-209ENST00000609477 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
HDDC2-209ENST00000609477 A6NJR5 290 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 DEXIO95424 95 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 SSRP1Q08945 709 aaKnown RBP16.38■□□□□ 0.21
HDDC2-209ENST00000609477 AP3B2Q13367 1082 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 PKN1Q16512 942 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 LRRC26Q2I0M4 334 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 PHKBQ93100 1093 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 INPP4AQ96PE3 977 aaPredicted RBP16.38■□□□□ 0.21
HDDC2-209ENST00000609477 NCOA5Q9HCD5 579 aaKnown RBP16.38■□□□□ 0.21
HDDC2-209ENST00000609477 C6orf50Q9HD87 102 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 STARD7Q9NQZ5 370 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 POLR3EQ9NVU0 708 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 DDX41Q9UJV9 622 aaKnown RBP16.38■□□□□ 0.21
HDDC2-209ENST00000609477 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
HDDC2-209ENST00000609477 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 MAFGO15525 162 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 GH1P01241 217 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 ICAM3P32942 547 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 TYW1BQ6NUM6 668 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 FERMT2Q96AC1 680 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 TOX2Q96NM4 488 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 TPCN1Q9ULQ1 816 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 PCDHA6Q9UN73 950 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 PCDHA8Q9Y5H6 950 aa16.37■□□□□ 0.21
HDDC2-209ENST00000609477 MYADML2A6NDP7 307 aa16.36■□□□□ 0.21
HDDC2-209ENST00000609477 RGS20O76081 388 aa16.36■□□□□ 0.21
HDDC2-209ENST00000609477 CLK2P49760 499 aaKnown RBP16.36■□□□□ 0.21
HDDC2-209ENST00000609477 MRPS9P82933 396 aaKnown RBP16.36■□□□□ 0.21
HDDC2-209ENST00000609477 SCRN1Q12765 414 aa16.36■□□□□ 0.21
HDDC2-209ENST00000609477 ANKRD33Q7Z3H0 272 aa16.36■□□□□ 0.21
HDDC2-209ENST00000609477 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
HDDC2-209ENST00000609477 IL31RAQ8NI17 732 aa16.36■□□□□ 0.21
HDDC2-209ENST00000609477 SENP7Q9BQF6 1050 aa16.36■□□□□ 0.21
HDDC2-209ENST00000609477 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
HDDC2-209ENST00000609477 A0A0U1RQG5 324 aaPredicted RBP16.35■□□□□ 0.21
HDDC2-209ENST00000609477 SPATA31C2B4DYI2 1134 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 FIBPO43427 364 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 ARIH2O95376 493 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 ATN1P54259 1190 aaPredicted RBP16.35■□□□□ 0.21
HDDC2-209ENST00000609477 RTP1P59025 263 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 BEX3Q00994 111 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 STK3Q13188 491 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 NEDD9Q14511 834 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 LY6KQ17RY6 165 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 TMEM63BQ5T3F8 832 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
HDDC2-209ENST00000609477 GPRASP2Q96D09 838 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 LARP6Q9BRS8 491 aaKnown RBP16.35■□□□□ 0.21
HDDC2-209ENST00000609477 STK36Q9NRP7 1315 aa16.35■□□□□ 0.21
HDDC2-209ENST00000609477 H0YGN5 161 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 XBP1P17861 261 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 CDK7P50613 346 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 ARHGAP1Q07960 439 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 UBE2SQ16763 222 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 DHX37Q8IY37 1157 aaKnown RBP16.34■□□□□ 0.21
HDDC2-209ENST00000609477 C7orf61Q8IZ16 206 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
HDDC2-209ENST00000609477 SLC43A3Q8NBI5 491 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 PPTC7Q8NI37 304 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 WASF1Q92558 559 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 VTI1AQ96AJ9 217 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 KIF2CQ99661 725 aa16.34■□□□□ 0.21
HDDC2-209ENST00000609477 PRKAG2Q9UGJ0 569 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms