RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 ALX1Q15699 326 aa20.32■□□□□ 0.84
CHMP4A-211ENST00000609024 PTPROQ16827 1216 aa20.32■□□□□ 0.84
CHMP4A-211ENST00000609024 MFSD6Q6ZSS7 791 aa20.32■□□□□ 0.84
CHMP4A-211ENST00000609024 MCF2L2Q86YR7 1114 aa20.32■□□□□ 0.84
CHMP4A-211ENST00000609024 DHX37Q8IY37 1157 aaKnown RBP20.32■□□□□ 0.84
CHMP4A-211ENST00000609024 FBXO22Q8NEZ5 403 aa20.32■□□□□ 0.84
CHMP4A-211ENST00000609024 EVI5LQ96CN4 794 aa20.32■□□□□ 0.84
CHMP4A-211ENST00000609024 GTF2IRD1Q9UHL9 959 aa20.32■□□□□ 0.84
CHMP4A-211ENST00000609024 LINC01553A4QN01 128 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 DHX16O60231 1041 aaKnown RBP20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 CXCL10P02778 98 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 AMHP03971 560 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 LEXMQ3ZCV2 418 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 ARHGEF16Q5VV41 709 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 CCDC62Q6P9F0 684 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 KHSRPQ92945 711 aaKnown RBP eCLIP20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 IWS1Q96ST2 819 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 MAF1Q9H063 256 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 HDAC6Q9UBN7 1215 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 INSL6Q9Y581 213 aa20.31■□□□□ 0.84
CHMP4A-211ENST00000609024 ABCB11O95342 1321 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 PRR33A8MZF0 331 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 FOXP2O15409 715 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 NBNO60934 754 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 FGAP02671 866 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 PSEN2P49810 448 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 ARHGAP1Q07960 439 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 PTK7Q13308 1070 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 PUS10Q3MIT2 529 aaKnown RBP20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 PTCRAQ6ISU1 281 aaPredicted RBP20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 EP400NLQ6ZTU2 488 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 OTUD7AQ8TE49 926 aaPredicted RBP20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 RMDN3Q96TC7 470 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 C11orf16Q9NQ32 467 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 MRVI1Q9Y6F6 885 aa20.3■□□□□ 0.84
CHMP4A-211ENST00000609024 EMSYQ7Z589 1322 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 GOLGA8HP0CJ92 632 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 PCP11498 1178 aaKnown RBP20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 HAND2P61296 217 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 RBL2Q08999 1139 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 LAMC2Q13753 1193 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 MFSD10Q14728 455 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 KIAA0753Q2KHM9 967 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 MCMDC2Q4G0Z9 681 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 FAM178BQ8IXR5 827 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 DHX38Q92620 1227 aaKnown RBP20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 KAT2BQ92831 832 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 TAAR1Q96RJ0 339 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 RNF41Q9H4P4 317 aaPredicted RBP20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 FAM50BQ9Y247 325 aa20.29■□□□□ 0.84
CHMP4A-211ENST00000609024 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 LGR5O75473 907 aa20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 CDC37Q16543 378 aaPredicted RBP20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 ALYREFQ86V81 257 aaKnown RBP20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 MYOCDQ8IZQ8 938 aa20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 SYTL5Q8TDW5 730 aaPredicted RBP20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 ESR2Q92731 530 aa20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 UBA5Q9GZZ9 404 aa20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 CD320Q9NPF0 282 aa20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 MRPL11Q9Y3B7 192 aaKnown RBP20.28■□□□□ 0.84
CHMP4A-211ENST00000609024 PTPRSQ13332 1948 aa20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 EIF3JO75822 258 aaKnown RBP20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 SNHG28P0DPA3 235 aa20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 GPNMBQ14956 572 aa20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 ZNF618Q5T7W0 954 aa20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 SAMD11Q96NU1 681 aa20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 CTAGE1Q96RT6 745 aa20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 DDX41Q9UJV9 622 aaKnown RBP20.27■□□□□ 0.84
CHMP4A-211ENST00000609024 SIP14410 1827 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 ZNF286BP0CG31 522 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 IL9P15248 144 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 EIF2AK2P19525 551 aaKnown RBP20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 TIGD5Q53EQ6 642 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 CCDC178Q5BJE1 867 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 PPTC7Q8NI37 304 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 EMID1Q96A84 441 aaPredicted RBP20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 ZKSCAN3Q9BRR0 538 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 C17orf80Q9BSJ5 609 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 KAT14Q9H8E8 782 aa20.26■□□□□ 0.83
CHMP4A-211ENST00000609024 RSPH10B2B2RC85 870 aa20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 RSPH10BP0C881 870 aa20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 HSPD1P10809 573 aaKnown RBP20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 THPOP40225 353 aa20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 MFAP1P55081 439 aaKnown RBP20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 IQCA1Q86XH1 822 aa20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 DGKHQ86XP1 1220 aa20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 TBC1D5Q92609 795 aa20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 MRPL38Q96DV4 380 aaKnown RBP20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 YME1L1Q96TA2 773 aa20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 CPVLQ9H3G5 476 aa20.25■□□□□ 0.83
CHMP4A-211ENST00000609024 GRXCR2A6NFK2 248 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 F2P00734 622 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 CFBP00751 764 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 DIEXFQ68CQ4 756 aaKnown RBP20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 KCNV1Q6PIU1 500 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 FBXO11Q86XK2 927 aa20.24■□□□□ 0.83
CHMP4A-211ENST00000609024 ADGRF4Q8IZF3 695 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms