RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 CTAGE5O15320 804 aa16.4■□□□□ 0.22
HDDC2-206ENST00000608461 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-206ENST00000608461 CDKL5O76039 1030 aa16.4■□□□□ 0.22
HDDC2-206ENST00000608461 RBM25P49756 843 aaKnown RBP16.4■□□□□ 0.22
HDDC2-206ENST00000608461 CPT1AP50416 773 aa16.4■□□□□ 0.22
HDDC2-206ENST00000608461 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
HDDC2-206ENST00000608461 FSCN1Q16658 493 aaKnown RBP16.4■□□□□ 0.22
HDDC2-206ENST00000608461 GNPTABQ3T906 1256 aa16.4■□□□□ 0.22
HDDC2-206ENST00000608461 PCNX4Q63HM2 1172 aa16.4■□□□□ 0.22
HDDC2-206ENST00000608461 GPKOWQ92917 476 aaPredicted RBP eCLIP16.4■□□□□ 0.22
HDDC2-206ENST00000608461 LENG1Q96BZ8 264 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-206ENST00000608461 GLT1D1Q96MS3 346 aa16.4■□□□□ 0.22
HDDC2-206ENST00000608461 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
HDDC2-206ENST00000608461 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
HDDC2-206ENST00000608461 DNAH12Q6ZR08 3092 aa16.4■□□□□ 0.22
HDDC2-206ENST00000608461 SMCO2A6NFE2 343 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 KPNA6O60684 536 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 PFKFB2O60825 505 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 ASGR1P07306 291 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 MYCLP12524 364 aaPredicted RBP16.39■□□□□ 0.21
HDDC2-206ENST00000608461 GNA11P29992 359 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 ADCY7P51828 1080 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 NEK4P51957 841 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 AK2P54819 239 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 SEPT14Q6ZU15 432 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 CCDC148Q8NFR7 591 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 EMID1Q96A84 441 aaPredicted RBP16.39■□□□□ 0.21
HDDC2-206ENST00000608461 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 ZMYND12Q9H0C1 365 aa16.39■□□□□ 0.21
HDDC2-206ENST00000608461 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
HDDC2-206ENST00000608461 A6NJR5 290 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 DEXIO95424 95 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 SSRP1Q08945 709 aaKnown RBP16.38■□□□□ 0.21
HDDC2-206ENST00000608461 AP3B2Q13367 1082 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 PKN1Q16512 942 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 LRRC26Q2I0M4 334 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 PHKBQ93100 1093 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 INPP4AQ96PE3 977 aaPredicted RBP16.38■□□□□ 0.21
HDDC2-206ENST00000608461 NCOA5Q9HCD5 579 aaKnown RBP16.38■□□□□ 0.21
HDDC2-206ENST00000608461 C6orf50Q9HD87 102 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 STARD7Q9NQZ5 370 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 POLR3EQ9NVU0 708 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 DDX41Q9UJV9 622 aaKnown RBP16.38■□□□□ 0.21
HDDC2-206ENST00000608461 MRVI1Q9Y6F6 885 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
HDDC2-206ENST00000608461 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 MAFGO15525 162 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 GH1P01241 217 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 ICAM3P32942 547 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 TYW1BQ6NUM6 668 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 FERMT2Q96AC1 680 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 TOX2Q96NM4 488 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 TPCN1Q9ULQ1 816 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 PCDHA6Q9UN73 950 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 PCDHA8Q9Y5H6 950 aa16.37■□□□□ 0.21
HDDC2-206ENST00000608461 MYADML2A6NDP7 307 aa16.36■□□□□ 0.21
HDDC2-206ENST00000608461 RGS20O76081 388 aa16.36■□□□□ 0.21
HDDC2-206ENST00000608461 CLK2P49760 499 aaKnown RBP16.36■□□□□ 0.21
HDDC2-206ENST00000608461 MRPS9P82933 396 aaKnown RBP16.36■□□□□ 0.21
HDDC2-206ENST00000608461 SCRN1Q12765 414 aa16.36■□□□□ 0.21
HDDC2-206ENST00000608461 ANKRD33Q7Z3H0 272 aa16.36■□□□□ 0.21
HDDC2-206ENST00000608461 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
HDDC2-206ENST00000608461 IL31RAQ8NI17 732 aa16.36■□□□□ 0.21
HDDC2-206ENST00000608461 SENP7Q9BQF6 1050 aa16.36■□□□□ 0.21
HDDC2-206ENST00000608461 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
HDDC2-206ENST00000608461 A0A0U1RQG5 324 aaPredicted RBP16.35■□□□□ 0.21
HDDC2-206ENST00000608461 SPATA31C2B4DYI2 1134 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 FIBPO43427 364 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 ARIH2O95376 493 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 ATN1P54259 1190 aaPredicted RBP16.35■□□□□ 0.21
HDDC2-206ENST00000608461 RTP1P59025 263 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 BEX3Q00994 111 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 STK3Q13188 491 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 NEDD9Q14511 834 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 LY6KQ17RY6 165 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 TMEM63BQ5T3F8 832 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 GIMAP8Q8ND71 665 aaPredicted RBP16.35■□□□□ 0.21
HDDC2-206ENST00000608461 GPRASP2Q96D09 838 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 LARP6Q9BRS8 491 aaKnown RBP16.35■□□□□ 0.21
HDDC2-206ENST00000608461 STK36Q9NRP7 1315 aa16.35■□□□□ 0.21
HDDC2-206ENST00000608461 H0YGN5 161 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 XBP1P17861 261 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 CDK7P50613 346 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 ARHGAP1Q07960 439 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 UBE2SQ16763 222 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 DHX37Q8IY37 1157 aaKnown RBP16.34■□□□□ 0.21
HDDC2-206ENST00000608461 C7orf61Q8IZ16 206 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 REXO1Q8N1G1 1221 aaKnown RBP16.34■□□□□ 0.21
HDDC2-206ENST00000608461 SLC43A3Q8NBI5 491 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 PPTC7Q8NI37 304 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 WASF1Q92558 559 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 VTI1AQ96AJ9 217 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 KIF2CQ99661 725 aa16.34■□□□□ 0.21
HDDC2-206ENST00000608461 PRKAG2Q9UGJ0 569 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms