RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 CCL15-CCL14A0A0B4J2E2 113 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 PTPRAP18433 802 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 CALML3P27482 149 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 CASP14P31944 242 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 NLRP12P59046 1061 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 MKRN4PQ13434 485 aaPredicted RBP7.77□□□□□ -1.16
CDC40-207ENST00000606893 POSTNQ15063 836 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 LRRC41Q15345 812 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 CCL15Q16663 113 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 UBE2SQ16763 222 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 INF2Q27J81 1249 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 RCSD1Q6JBY9 416 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 NCAPG2Q86XI2 1143 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 NOSTRINQ8IVI9 506 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 ATG4CQ96DT6 458 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 AGBL1Q96MI9 1066 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 LZTS2Q9BRK4 669 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 CRACR2AQ9BSW2 395 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 TMOD4Q9NZQ9 345 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 PAXBP1Q9Y5B6 917 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 NRXN2Q9P2S2 1712 aa7.77□□□□□ -1.16
CDC40-207ENST00000606893 A0A087X0B3 334 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 TMEM179Q6ZVK1 233 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 JMYQ8N9B5 988 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 IGSF22Q8N9C0 903 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 RTEL1Q9NZ71 1219 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 RGPD3A6NKT7 1758 aaPredicted RBP7.77□□□□□ -1.17
CDC40-207ENST00000606893 RGPD4Q7Z3J3 1758 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L15C9J2P7 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L13C9JLJ4 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L11C9JVI0 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L18D6R9N7 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L22D6RA61 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L17D6RBQ6 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L19D6RCP7 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L20D6RJB6 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 IFNAR1P17181 557 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 KLK7P49862 253 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 CLCN6P51797 869 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L24Q0WX57 530 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 SLC39A14Q15043 492 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 NCAPH2Q6IBW4 605 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 USP17L6PQ6QN14 398 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 TMCO3Q6UWJ1 677 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 SRBD1Q8N5C6 995 aaKnown RBP7.77□□□□□ -1.17
CDC40-207ENST00000606893 CAGE1Q8TC20 777 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 SGSM3Q96HU1 749 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 BIN2Q9UBW5 565 aaPredicted RBP7.77□□□□□ -1.17
CDC40-207ENST00000606893 MAN1B1Q9UKM7 699 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 JRKLQ9Y4A0 524 aa7.77□□□□□ -1.17
CDC40-207ENST00000606893 TOMM70O94826 608 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 TOB1P50616 345 aaPredicted RBP7.76□□□□□ -1.17
CDC40-207ENST00000606893 RBL2Q08999 1139 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 SIAH1Q8IUQ4 282 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 ANKRD13AQ8IZ07 590 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 ZNF280CQ8ND82 737 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 CCDC148Q8NFR7 591 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 FAM107BQ9H098 131 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 CCDC194A0A1B0GVG4 234 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 TPM3P06753 285 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 CD44P16070 742 aaKnown RBP7.76□□□□□ -1.17
CDC40-207ENST00000606893 RCAN1P53805 252 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 SATB1Q01826 763 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 CUL4BQ13620 913 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 AGXT2Q9BYV1 514 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 MRPL44Q9H9J2 332 aaKnown RBP7.76□□□□□ -1.17
CDC40-207ENST00000606893 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.76□□□□□ -1.17
CDC40-207ENST00000606893 ELP1O95163 1332 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 CTAGE5O15320 804 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 ITGBL1O95965 494 aaPredicted RBP7.76□□□□□ -1.17
CDC40-207ENST00000606893 PGK2P07205 417 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 BMP3P12645 472 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 GJA5P36382 358 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 NAPAP54920 295 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 UBXN1Q04323 297 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 SCYL3Q8IZE3 742 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 FBXL16Q8N461 479 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 RIN2Q8WYP3 895 aaPredicted RBP7.76□□□□□ -1.17
CDC40-207ENST00000606893 RNF26Q9BY78 433 aaPredicted RBP7.76□□□□□ -1.17
CDC40-207ENST00000606893 SUFUQ9UMX1 484 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 PPP2R2CQ9Y2T4 447 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 SH3BP1Q9Y3L3 701 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 SNCAIPQ9Y6H5 919 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 FER1L6Q2WGJ9 1857 aa7.76□□□□□ -1.17
CDC40-207ENST00000606893 VCAM1P19320 739 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 TXKP42681 527 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 APBA1Q02410 837 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 GABPAQ06546 454 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 GPATCH4Q5T3I0 446 aaKnown RBP7.75□□□□□ -1.17
CDC40-207ENST00000606893 FAM83AQ86UY5 434 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 GOPCQ9HD26 462 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 FAM217BQ9NTX9 383 aaPredicted RBP7.75□□□□□ -1.17
CDC40-207ENST00000606893 TMEM260Q9NX78 707 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 EHD2Q9NZN4 543 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.75□□□□□ -1.17
CDC40-207ENST00000606893 MYO9BQ13459 2157 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 PHF20L1A8MW92 1017 aa7.75□□□□□ -1.17
CDC40-207ENST00000606893 DDX39AO00148 427 aaKnown RBP7.75□□□□□ -1.17
CDC40-207ENST00000606893 NKRFO15226 690 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDC40-207ENST00000606893 N4BP1O75113 896 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms