RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 GDF6Q6KF10 455 aaPredicted RBP15.69■□□□□ 0.1
CTSA-212ENST00000606394 CCDC62Q6P9F0 684 aa15.69■□□□□ 0.1
CTSA-212ENST00000606394 POTEBQ6S5H4 581 aa15.69■□□□□ 0.1
CTSA-212ENST00000606394 TMCO2Q7Z6W1 182 aaPredicted RBP15.69■□□□□ 0.1
CTSA-212ENST00000606394 COPS5Q92905 334 aa15.69■□□□□ 0.1
CTSA-212ENST00000606394 MRPL38Q96DV4 380 aaKnown RBP15.69■□□□□ 0.1
CTSA-212ENST00000606394 SAMD11Q96NU1 681 aa15.69■□□□□ 0.1
CTSA-212ENST00000606394 UIMC1Q96RL1 719 aa15.69■□□□□ 0.1
CTSA-212ENST00000606394 PRKAG3Q9UGI9 489 aa15.69■□□□□ 0.1
CTSA-212ENST00000606394 GTF2IRD1Q9UHL9 959 aa15.69■□□□□ 0.1
CTSA-212ENST00000606394 ZNF318Q5VUA4 2279 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 ORC4O43929 436 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 MMP3P08254 477 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 TOP1P11387 765 aaKnown RBP15.68■□□□□ 0.1
CTSA-212ENST00000606394 IL9P15248 144 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 SLC16A2P36021 539 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 TIGD5Q53EQ6 642 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 TTBK2Q6IQ55 1244 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 RASGRP2Q7LDG7 609 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 FBXO22Q8NEZ5 403 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 PPP1R13LQ8WUF5 828 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 AFG1LQ8WV93 481 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 DHX38Q92620 1227 aaKnown RBP15.68■□□□□ 0.1
CTSA-212ENST00000606394 KATNAL1Q9BW62 490 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 ANAPC4Q9UJX5 808 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 EMSYQ7Z589 1322 aa15.68■□□□□ 0.1
CTSA-212ENST00000606394 RANBP6O60518 1105 aaKnown RBP15.67■□□□□ 0.1
CTSA-212ENST00000606394 ARIH2O95376 493 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 GH1P01241 217 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 FGRP09769 529 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 PDE4AP27815 886 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 CHMP4BP1P59074 171 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 PTK7Q13308 1070 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 COL19A1Q14993 1142 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 DGKDQ16760 1214 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 ZMYM1Q5SVZ6 1142 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 C7orf31Q8N865 590 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 KAT2BQ92831 832 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 EMID1Q96A84 441 aaPredicted RBP15.67■□□□□ 0.1
CTSA-212ENST00000606394 SEC62Q99442 399 aaKnown RBP15.67■□□□□ 0.1
CTSA-212ENST00000606394 MTMR7Q9Y216 660 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 TTC41PQ6P2S7 1318 aa15.67■□□□□ 0.1
CTSA-212ENST00000606394 HTRA4P83105 476 aaPredicted RBP15.66■□□□□ 0.1
CTSA-212ENST00000606394 ARHGAP1Q07960 439 aa15.66■□□□□ 0.1
CTSA-212ENST00000606394 SP7Q8TDD2 431 aaPredicted RBP15.66■□□□□ 0.1
CTSA-212ENST00000606394 TMEM47Q9BQJ4 181 aa15.66■□□□□ 0.1
CTSA-212ENST00000606394 BACH2Q9BYV9 841 aa15.66■□□□□ 0.1
CTSA-212ENST00000606394 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
CTSA-212ENST00000606394 TCP11L1Q9NUJ3 509 aa15.66■□□□□ 0.1
CTSA-212ENST00000606394 NCK2O43639 380 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 LGR5O75473 907 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 AMHP03971 560 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 CTDSPL2Q05D32 466 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 TSHZ3Q63HK5 1081 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 PABPC5Q96DU9 382 aaKnown RBP15.65■□□□□ 0.1
CTSA-212ENST00000606394 FBXL18Q96ME1 805 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 IWS1Q96ST2 819 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 C17orf80Q9BSJ5 609 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 DCTPP1Q9H773 170 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 GPCPD1Q9NPB8 672 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 HDAC6Q9UBN7 1215 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 USP34Q70CQ2 3546 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 C5orf42Q9H799 3197 aa15.65■□□□□ 0.1
CTSA-212ENST00000606394 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 FOXP2O15409 715 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 F2P00734 622 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 PDHBP11177 359 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 ZP2Q05996 745 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 MKRN4PQ13434 485 aaPredicted RBP15.64■□□□□ 0.09
CTSA-212ENST00000606394 TCTN1Q2MV58 587 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 TRIM71Q2Q1W2 868 aaKnown RBP15.64■□□□□ 0.09
CTSA-212ENST00000606394 EPC2Q52LR7 807 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 TRAF7Q6Q0C0 670 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 MICAL3Q7RTP6 2002 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 BANK1Q8NDB2 785 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 NSUN6Q8TEA1 469 aaKnown RBP15.64■□□□□ 0.09
CTSA-212ENST00000606394 TTC14Q96N46 770 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 FSD1Q9BTV5 496 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 INCENPQ9NQS7 918 aa15.64■□□□□ 0.09
CTSA-212ENST00000606394 FRMPD2Q68DX3 1309 aaPredicted RBP15.64■□□□□ 0.09
CTSA-212ENST00000606394 COL4A6Q14031 1691 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 H3BNC9 293 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 H3BQ06 376 aaPredicted RBP15.63■□□□□ 0.09
CTSA-212ENST00000606394 HAS3O00219 553 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 SNHG28P0DPA3 235 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 PSEN2P49810 448 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 ZNF543Q08ER8 600 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 LAMC2Q13753 1193 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 MBTPS1Q14703 1052 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 ALX1Q15699 326 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 STXBP2Q15833 593 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 LY6KQ17RY6 165 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 GPATCH4Q5T3I0 446 aaKnown RBP15.63■□□□□ 0.09
CTSA-212ENST00000606394 ZNF618Q5T7W0 954 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 FAM117BQ6P1L5 589 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 ADHFE1Q8IWW8 467 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 PPTC7Q8NI37 304 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 SNX27Q96L92 541 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 MFSD14AQ96MC6 490 aa15.63■□□□□ 0.09
CTSA-212ENST00000606394 KIAA1217Q5T5P2 1943 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms