RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CHD9Q3L8U1 2897 aa12.35□□□□□ -0.43
TUBE1-210ENST00000604967 COL6A3P12111 3177 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 KLF18A0A0U1RQI7 1052 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 GCOM1H8Y6P7 765 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-210ENST00000604967 EIF3JO75822 258 aaKnown RBP12.34□□□□□ -0.43
TUBE1-210ENST00000604967 NEFLP07196 543 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 MYL3P08590 195 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 POLR2MP0CAP2 368 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 MYCLP12524 364 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-210ENST00000604967 KIF5BP33176 963 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
TUBE1-210ENST00000604967 STXBP2Q15833 593 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 UBE2SQ16763 222 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 RNF20Q5VTR2 975 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 WWC2Q6AWC2 1192 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 Q6ZUG5 572 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 Q7L0L9 218 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 TMTC2Q8N394 836 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 VTI1AQ96AJ9 217 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 RRP36Q96EU6 259 aaKnown RBP12.34□□□□□ -0.43
TUBE1-210ENST00000604967 AGXT2Q9BYV1 514 aa12.34□□□□□ -0.43
TUBE1-210ENST00000604967 ALDH8A1Q9H2A2 487 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-210ENST00000604967 DCDC2CA8MYV0 355 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 DTNBO60941 627 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 PPFIA3O75145 1194 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 TIMP1P01033 207 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 MMP3P08254 477 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 RPS6KB1P23443 525 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 CYP2C18P33260 490 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 TOB2Q14106 344 aaPredicted RBP12.33□□□□□ -0.44
TUBE1-210ENST00000604967 TTLL4Q14679 1199 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 FAM109BQ6ICB4 259 aaPredicted RBP12.33□□□□□ -0.44
TUBE1-210ENST00000604967 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 LARP6Q9BRS8 491 aaKnown RBP12.33□□□□□ -0.44
TUBE1-210ENST00000604967 PPP1R12CQ9BZL4 782 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 WNT8AQ9H1J5 351 aa12.33□□□□□ -0.44
TUBE1-210ENST00000604967 CDH23Q9H251 3354 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 NKRFO15226 690 aaKnown RBP eCLIP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 ZBTB43O43298 467 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 SEC24BO95487 1268 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 CYP2C9P11712 490 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 HOXD8P13378 290 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 CSF2RAP15509 400 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 RAG1P15918 1043 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 UBA1P22314 1058 aaKnown RBP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 NTRK3Q16288 839 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 PKN1Q16512 942 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 RTN1Q16799 776 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 HSDL1Q3SXM5 330 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 MYSM1Q5VVJ2 828 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 FBXL16Q8N461 479 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 BRF1Q92994 677 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 EMID1Q96A84 441 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 INPP4AQ96PE3 977 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 LBHD1Q9BQE6 289 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 MTG1Q9BT17 334 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 NOC4LQ9BVI4 516 aaKnown RBP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 MAP3K20Q9NYL2 800 aaKnown RBP12.32□□□□□ -0.44
TUBE1-210ENST00000604967 RTEL1Q9NZ71 1219 aa12.32□□□□□ -0.44
TUBE1-210ENST00000604967 NID2Q14112 1375 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 GOLGA8AA7E2F4 631 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 SPATA31C2B4DYI2 1134 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 STXBP3O00186 592 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 CABYRO75952 493 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 GH1P01241 217 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 ZNF286BP0CG31 522 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 CALM1P0DP23 149 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 CALM2P0DP24 149 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 CALM3P0DP25 149 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 ACRP10323 421 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 ITGB5P18084 799 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 CASTP20810 708 aaKnown RBP12.31□□□□□ -0.44
TUBE1-210ENST00000604967 GNAQP50148 359 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 CPT1AP50416 773 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 KRT32Q14532 448 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 GPNMBQ14956 572 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 MFSD5Q6N075 450 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 SAMD3Q8N6K7 520 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 WNT8BQ93098 351 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 PGBD1Q96JS3 809 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.31□□□□□ -0.444e-13■■□□□ 13.6
TUBE1-210ENST00000604967 NCOA5Q9HCD5 579 aaKnown RBP12.31□□□□□ -0.44
TUBE1-210ENST00000604967 ZSWIM6Q9HCJ5 1215 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 MRVI1Q9Y6F6 885 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 V9GY48 417 aaPredicted RBP12.31□□□□□ -0.44
TUBE1-210ENST00000604967 DOCK5Q9H7D0 1870 aa12.31□□□□□ -0.44
TUBE1-210ENST00000604967 HAS3O00219 553 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 EDIL3O43854 480 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 ATP9AO75110 1047 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 GGPS1O95749 300 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 CCND2P30279 289 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 ICAM3P32942 547 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 EVCP57679 992 aa12.3□□□□□ -0.44
TUBE1-210ENST00000604967 ZNF200P98182 395 aaPredicted RBP12.3□□□□□ -0.44
TUBE1-210ENST00000604967 FPGSQ05932 587 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms