RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ATP5J2-PTCD1G3V325 749 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 H3BRJ5 948 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 M0R3H8 397 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 IVLP07476 585 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 GCFC2P16383 781 aaKnown RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 KCNA6P17658 529 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 HADHAP40939 763 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 NRLP54845 237 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 SLC12A2P55011 1212 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 PDE4BQ07343 736 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 NSUN2Q08J23 767 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 IFRD2Q12894 506 aaPredicted RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 CRYMQ14894 314 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 SMAD1Q15797 465 aaKnown RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 MAJINQ3KP22 176 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 CCDC178Q5BJE1 867 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 FAAH2Q6GMR7 532 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 ISM2Q6H9L7 571 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 MYLK4Q86YV6 388 aaPredicted RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 RNF214Q8ND24 703 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 ZNF75CPQ92670 426 aaPredicted RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 GJA10Q969M2 543 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 PLEKHG4BQ96PX9 1271 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 ALG1Q9BT22 464 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 SPON2Q9BUD6 331 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 CAAP1Q9H8G2 361 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 RAB6BQ9NRW1 208 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 IFT80Q9P2H3 777 aaPredicted RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 HERC5Q9UII4 1024 aaKnown RBP5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 SPATA31E1Q6ZUB1 1445 aa5.62□□□□□ -1.51
SPTBN1-206ENST00000602898 K7ENM7 598 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 P4HA2O15460 535 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 PDPK1O15530 556 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 RDXP35241 583 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 DDIT3P35638 169 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 KIF11P52732 1056 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 TPM4P67936 248 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 AP1B1Q10567 949 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 FILIP1LQ4L180 1135 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 SYNE3Q6ZMZ3 975 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 MFSD6Q6ZSS7 791 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 SYDE1Q6ZW31 735 aaPredicted RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 CEP68Q76N32 757 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 HEATR4Q86WZ0 1026 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 ARMC2Q8NEN0 867 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 NUP133Q8WUM0 1156 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 DNAAF4Q8WXU2 420 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 SYAP1Q96A49 352 aaPredicted RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 TARS2Q9BW92 718 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 NLRC4Q9NPP4 1024 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 GGA3Q9NZ52 723 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 CDC23Q9UJX2 597 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 PNMA8BQ9ULN7 279 aaPredicted RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 LRRFIP2Q9Y608 721 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 USP31Q70CQ4 1352 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 RALGAPBQ86X10 1494 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 ROCK2O75116 1388 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 GPRASP1Q5JY77 1395 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 B2RBV5 119 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 OPLAHO14841 1288 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 FZD6O60353 706 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 BAG4O95429 457 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 FGFR1OPO95684 399 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 CCDC159P0C7I6 412 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 ELF1P32519 619 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 MPP1Q00013 466 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 CCNG2Q16589 344 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 HHATQ5VTY9 493 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 TOGARAM2Q6ZUX3 1019 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 NLRP14Q86W24 1093 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 SLC41A1Q8IVJ1 513 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 EHBP1Q8NDI1 1231 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 IL17REQ8NFR9 667 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 HPS3Q969F9 1004 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 SLC13A1Q9BZW2 595 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 NFKBIL1Q9UBC1 381 aaPredicted RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 C2orf81A6NN90 581 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 KIAA0754O94854 1291 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 TGDSO95455 350 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 NR3C2P08235 984 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 NLRP12P59046 1061 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 PLIN5Q00G26 463 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 ZRSR1Q15695 479 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 KCNV1Q6PIU1 500 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 CLEC17AQ6ZS10 378 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 MFSD3Q96ES6 412 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 JAKMIP1Q96N16 626 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 TBC1D32Q96NH3 1257 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 TRIM56Q9BRZ2 755 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 NAA15Q9BXJ9 866 aaKnown RBP5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 AAASQ9NRG9 546 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 PSD3Q9NYI0 1048 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 UBAP1Q9NZ09 502 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 PCDHGB5Q9Y5G0 923 aa5.61□□□□□ -1.51
SPTBN1-206ENST00000602898 HFM1A2PYH4 1435 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 RREB1Q92766 1687 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 ZNF335Q9H4Z2 1342 aaPredicted RBP5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 SYCP2Q9BX26 1530 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 FAM25EA8MYX2 175 aa5.6□□□□□ -1.51
SPTBN1-206ENST00000602898 PLOD3O60568 738 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms