RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 KIFC2Q96AC6 838 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 SWAP70Q9UH65 585 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 RREB1Q92766 1687 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 PLEKP08567 350 aaPredicted RBP12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 PRPHP41219 470 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 EPS15P42566 896 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 GPATCH4Q5T3I0 446 aaKnown RBP12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 GPBP1Q86WP2 473 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 BLOC1S4Q9NUP1 217 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 PI4KBQ9UBF8 816 aa12.84□□□□□ -0.35
ARHGEF1-220ENST00000600274 TADA3O75528 432 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 NDUFA10O95299 355 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 PBX1P40424 430 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 ECE1P42892 770 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 PODNQ7Z5L7 613 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 ANO3Q9BYT9 981 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 SEMA6BQ9H3T3 888 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 SFI1A8K8P3 1242 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 ONECUT3O60422 494 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 MATR3P43243 847 aaKnown RBP eCLIP12.83□□□□□ -0.363e-24■■□□□ 13.2
ARHGEF1-220ENST00000600274 APBA1Q02410 837 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 BMS1Q14692 1282 aaKnown RBP12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 CCDC93Q567U6 631 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 CYP2W1Q8TAV3 490 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 GDAP1L1Q96MZ0 367 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 DUSP10Q9Y6W6 482 aa12.83□□□□□ -0.36
ARHGEF1-220ENST00000600274 DNM2P50570 870 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 PTPROQ16827 1216 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 TCERG1LQ5VWI1 586 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 RRAGAQ7L523 313 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 FGFBP2Q9BYJ0 223 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 RIC8AQ9NPQ8 531 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 ZNF277Q9NRM2 450 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 PANK4Q9NVE7 773 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 ZNF446Q9NWS9 450 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 TMOD2Q9NZR1 351 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 DDX39AO00148 427 aaKnown RBP12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 AKR1B10O60218 316 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 NDUFB10O96000 172 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 EEF1GP26641 437 aaKnown RBP12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 KCNB1Q14721 858 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 DHTKD1Q96HY7 919 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 CCDC42Q96M95 316 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 NAA15Q9BXJ9 866 aaKnown RBP12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 PLEKHA4Q9H4M7 779 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.82□□□□□ -0.366e-7■□□□□ 9.1
ARHGEF1-220ENST00000600274 JADE2Q9NQC1 790 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 MRFAP1Q9Y605 127 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 PHACTR2O75167 634 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 PLS1Q14651 629 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 MAEAQ7L5Y9 396 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 TMC4Q7Z404 712 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 LARGE2Q8N3Y3 721 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 RAD54LQ92698 747 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 GOLGA1Q92805 767 aa12.82□□□□□ -0.36
ARHGEF1-220ENST00000600274 JAG1P78504 1218 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 FBXO11Q86XK2 927 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 FAM114A1Q8IWE2 563 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 HAS1Q92839 578 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 NAPGQ99747 312 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 TSG101Q99816 390 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 THAP9Q9H5L6 903 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 ZMYND10O75800 440 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 TERF2Q15554 542 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 TBC1D10BQ4KMP7 808 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 FAM26FQ5R3K3 315 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 HHIPL2Q6UWX4 724 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 ACER1Q8TDN7 264 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 PARD6BQ9BYG5 372 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 KCND1Q9NSA2 647 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 EFCAB8A8MWE9 144 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 EPHB6O15197 1021 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 JAKMIP2Q96AA8 810 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 C7orf25Q9BPX7 421 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 HOMER2Q9NSB8 354 aa12.81□□□□□ -0.36
ARHGEF1-220ENST00000600274 KIAA1551Q9HCM1 1747 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 PLA2G4BP0C869 781 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 SPA17Q15506 151 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 EZH2Q15910 746 aaKnown RBP12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 DACT2Q5SW24 774 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 PIGOQ8TEQ8 1089 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 CUEDC2Q9H467 287 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 BCAS3Q9H6U6 928 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 LMAN1P49257 510 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 PSMC6P62333 389 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 ARHGAP4P98171 946 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 COASYQ13057 564 aa12.8□□□□□ -0.36
ARHGEF1-220ENST00000600274 UNC13DQ70J99 1090 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms