RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 LY6KQ17RY6 165 aa32.44■■■□□ 2.78
ZNF558-206ENST00000599938 GPKOWQ92917 476 aaPredicted RBP eCLIP32.44■■■□□ 2.78
ZNF558-206ENST00000599938 FRMPD4Q14CM0 1322 aa32.44■■■□□ 2.78
ZNF558-206ENST00000599938 TRIM43BA6NCK2 446 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 PIK3CDO00329 1044 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 MYL3P08590 195 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 CDC27P30260 824 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 CDK7P50613 346 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 USP17L6PQ6QN14 398 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 VSIG10LQ86VR7 867 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 FBXL16Q8N461 479 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 TRIM43Q96BQ3 446 aaPredicted RBP32.43■■■□□ 2.78
ZNF558-206ENST00000599938 TMEM39AQ9NV64 488 aa32.43■■■□□ 2.78
ZNF558-206ENST00000599938 GH1P01241 217 aa32.42■■■□□ 2.78
ZNF558-206ENST00000599938 FAAP100Q0VG06 881 aa32.42■■■□□ 2.78
ZNF558-206ENST00000599938 FUT2Q10981 343 aa32.42■■■□□ 2.78
ZNF558-206ENST00000599938 RUFY3Q7L099 469 aa32.42■■■□□ 2.78
ZNF558-206ENST00000599938 AGXT2Q9BYV1 514 aa32.42■■■□□ 2.78
ZNF558-206ENST00000599938 PSTPIP2Q9H939 334 aa32.42■■■□□ 2.78
ZNF558-206ENST00000599938 FAM217BQ9NTX9 383 aaPredicted RBP32.42■■■□□ 2.78
ZNF558-206ENST00000599938 CCDC196A0A1B0GTZ2 297 aa32.41■■■□□ 2.78
ZNF558-206ENST00000599938 A6NJR5 290 aa32.41■■■□□ 2.78
ZNF558-206ENST00000599938 MEIS2O14770 477 aa32.41■■■□□ 2.78
ZNF558-206ENST00000599938 FXR1P51114 621 aaKnown RBP eCLIP32.41■■■□□ 2.78
ZNF558-206ENST00000599938 PSMC6P62333 389 aa32.41■■■□□ 2.78
ZNF558-206ENST00000599938 PURAQ00577 322 aaKnown RBP32.41■■■□□ 2.78
ZNF558-206ENST00000599938 ITGA7Q13683 1181 aa32.41■■■□□ 2.78
ZNF558-206ENST00000599938 ZSWIM6Q9HCJ5 1215 aa32.41■■■□□ 2.78
ZNF558-206ENST00000599938 DDX41Q9UJV9 622 aaKnown RBP32.41■■■□□ 2.78
ZNF558-206ENST00000599938 CYP46A1Q9Y6A2 500 aa32.41■■■□□ 2.78
ZNF558-206ENST00000599938 NID2Q14112 1375 aa32.41■■■□□ 2.78
ZNF558-206ENST00000599938 KIAA0355O15063 1070 aa32.4■■■□□ 2.78
ZNF558-206ENST00000599938 ARHGAP1Q07960 439 aa32.4■■■□□ 2.78
ZNF558-206ENST00000599938 WWC2Q6AWC2 1192 aa32.4■■■□□ 2.78
ZNF558-206ENST00000599938 FAM126BQ8IXS8 530 aa32.4■■■□□ 2.78
ZNF558-206ENST00000599938 TLR3O15455 904 aaKnown RBP32.39■■■□□ 2.78
ZNF558-206ENST00000599938 RGS20O76081 388 aa32.39■■■□□ 2.78
ZNF558-206ENST00000599938 TDHQ8IZJ6 230 aa32.39■■■□□ 2.78
ZNF558-206ENST00000599938 SLC43A3Q8NBI5 491 aa32.39■■■□□ 2.78
ZNF558-206ENST00000599938 AFG1LQ8WV93 481 aa32.39■■■□□ 2.78
ZNF558-206ENST00000599938 BADQ92934 168 aa32.39■■■□□ 2.78
ZNF558-206ENST00000599938 ZFP91Q96JP5 570 aaPredicted RBP32.39■■■□□ 2.78
ZNF558-206ENST00000599938 MTG1Q9BT17 334 aaPredicted RBP32.39■■■□□ 2.78
ZNF558-206ENST00000599938 V9GY48 417 aaPredicted RBP32.39■■■□□ 2.78
ZNF558-206ENST00000599938 GRIN2DO15399 1336 aa32.38■■■□□ 2.77
ZNF558-206ENST00000599938 RAG1P15918 1043 aa32.38■■■□□ 2.77
ZNF558-206ENST00000599938 ADD1P35611 737 aaKnown RBP32.38■■■□□ 2.77
ZNF558-206ENST00000599938 NAPAP54920 295 aa32.38■■■□□ 2.77
ZNF558-206ENST00000599938 SEZ6LQ9BYH1 1024 aa32.38■■■□□ 2.77
ZNF558-206ENST00000599938 UPF3BQ9BZI7 483 aaKnown RBP32.38■■■□□ 2.77
ZNF558-206ENST00000599938 TM6SF1Q9BZW5 370 aa32.38■■■□□ 2.77
ZNF558-206ENST00000599938 TBX21Q9UL17 535 aa32.38■■■□□ 2.77
ZNF558-206ENST00000599938 SCN10AQ9Y5Y9 1956 aa32.38■■■□□ 2.77
ZNF558-206ENST00000599938 KPNA6O60684 536 aa32.37■■■□□ 2.77
ZNF558-206ENST00000599938 UBE2SQ16763 222 aa32.37■■■□□ 2.77
ZNF558-206ENST00000599938 GNPTABQ3T906 1256 aa32.37■■■□□ 2.77
ZNF558-206ENST00000599938 PPP1R18Q6NYC8 613 aa32.37■■■□□ 2.77
ZNF558-206ENST00000599938 KCNV1Q6PIU1 500 aa32.37■■■□□ 2.77
ZNF558-206ENST00000599938 hCG_1984214I3L0E3 225 aa32.36■■■□□ 2.77
ZNF558-206ENST00000599938 STAM2O75886 525 aa32.36■■■□□ 2.77
ZNF558-206ENST00000599938 MMP3P08254 477 aa32.36■■■□□ 2.77
ZNF558-206ENST00000599938 ITGB8P26012 769 aa32.36■■■□□ 2.77
ZNF558-206ENST00000599938 ZNF713Q8N859 430 aaPredicted RBP32.36■■■□□ 2.77
ZNF558-206ENST00000599938 EMID1Q96A84 441 aaPredicted RBP32.36■■■□□ 2.77
ZNF558-206ENST00000599938 MRPS9P82933 396 aaKnown RBP32.35■■■□□ 2.77
ZNF558-206ENST00000599938 SPDYE3A6NKU9 549 aa32.34■■■□□ 2.77
ZNF558-206ENST00000599938 UBA1P22314 1058 aaKnown RBP32.34■■■□□ 2.77
ZNF558-206ENST00000599938 LAMC2Q13753 1193 aa32.34■■■□□ 2.77
ZNF558-206ENST00000599938 TOB2Q14106 344 aaPredicted RBP32.34■■■□□ 2.77
ZNF558-206ENST00000599938 PCNX4Q63HM2 1172 aa32.34■■■□□ 2.77
ZNF558-206ENST00000599938 TYW1BQ6NUM6 668 aa32.34■■■□□ 2.77
ZNF558-206ENST00000599938 DHX37Q8IY37 1157 aaKnown RBP32.34■■■□□ 2.77
ZNF558-206ENST00000599938 MYH7BA7E2Y1 1941 aa32.34■■■□□ 2.77
ZNF558-206ENST00000599938 SZT2Q5T011 3432 aa32.33■■■□□ 2.77
ZNF558-206ENST00000599938 STXBP3O00186 592 aa32.33■■■□□ 2.77
ZNF558-206ENST00000599938 CD4P01730 458 aa32.33■■■□□ 2.77
ZNF558-206ENST00000599938 INPP4AQ96PE3 977 aaPredicted RBP32.33■■■□□ 2.77
ZNF558-206ENST00000599938 BARHL2Q9NY43 387 aa32.33■■■□□ 2.77
ZNF558-206ENST00000599938 SORBS3O60504 671 aa32.32■■■□□ 2.76
ZNF558-206ENST00000599938 GGPS1O95749 300 aa32.32■■■□□ 2.76
ZNF558-206ENST00000599938 TGFB3P10600 412 aa32.32■■■□□ 2.76
ZNF558-206ENST00000599938 EVCP57679 992 aa32.32■■■□□ 2.76
ZNF558-206ENST00000599938 FAM47CQ5HY64 1035 aa32.32■■■□□ 2.76
ZNF558-206ENST00000599938 XRRA1Q6P2D8 792 aa32.32■■■□□ 2.76
ZNF558-206ENST00000599938 PPTC7Q8NI37 304 aa32.32■■■□□ 2.76
ZNF558-206ENST00000599938 RTEL1Q9NZ71 1219 aa32.32■■■□□ 2.76
ZNF558-206ENST00000599938 B4GALT4O60513 344 aa32.31■■■□□ 2.76
ZNF558-206ENST00000599938 EIF5BO60841 1220 aaKnown RBP32.31■■■□□ 2.76
ZNF558-206ENST00000599938 PDIA3P30101 505 aaKnown RBP32.31■■■□□ 2.76
ZNF558-206ENST00000599938 ADCY7P51828 1080 aa32.31■■■□□ 2.76
ZNF558-206ENST00000599938 DGKDQ16760 1214 aa32.31■■■□□ 2.76
ZNF558-206ENST00000599938 PFKFB3Q16875 520 aaPredicted RBP32.31■■■□□ 2.76
ZNF558-206ENST00000599938 CELF3Q5SZQ8 465 aaKnown RBP32.31■■■□□ 2.76
ZNF558-206ENST00000599938 TRPV6Q9H1D0 765 aa32.31■■■□□ 2.76
ZNF558-206ENST00000599938 ALDH8A1Q9H2A2 487 aaPredicted RBP32.31■■■□□ 2.76
ZNF558-206ENST00000599938 RIC8AQ9NPQ8 531 aa32.31■■■□□ 2.76
ZNF558-206ENST00000599938 FIBPO43427 364 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 SLC34A2O95436 690 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 TIMP1P01033 207 aa32.3■■■□□ 2.76
ZNF558-206ENST00000599938 SCG2P13521 617 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms