RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 VWA5AO00534 786 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 WDR46O15213 610 aaKnown RBP5.38□□□□□ -1.55
HERC3-213ENST00000598772 GDF9O60383 454 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 LGR5O75473 907 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 MAP4K4O95819 1239 aaPredicted RBP5.38□□□□□ -1.55
HERC3-213ENST00000598772 GLP2RO95838 553 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 CFHP08603 1231 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 WEE2P0C1S8 567 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 CKBP12277 381 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 ADORA1P30542 326 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 COPB2P35606 906 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 GNAI1P63096 354 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 SHC2P98077 582 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 CSTF1Q05048 431 aaKnown RBP5.38□□□□□ -1.55
HERC3-213ENST00000598772 TBC1D8BQ0IIM8 1120 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 FOXC1Q12948 553 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 BRDTQ58F21 947 aaPredicted RBP5.38□□□□□ -1.55
HERC3-213ENST00000598772 IQSEC1Q6DN90 963 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 PDZD3Q86UT5 571 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 FBXO16Q8IX29 292 aaPredicted RBP5.38□□□□□ -1.55
HERC3-213ENST00000598772 OR6J1Q8NGC5 347 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 CAGE1Q8TC20 777 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 ZNF384Q8TF68 577 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 DDX1Q92499 740 aaKnown RBP5.38□□□□□ -1.55
HERC3-213ENST00000598772 SUSD6Q92537 303 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 BICC1Q9H694 974 aaKnown RBP5.38□□□□□ -1.55
HERC3-213ENST00000598772 HOMER2Q9NSB8 354 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 CEP126Q9P2H0 1117 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 RAB23Q9ULC3 237 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 CA14Q9ULX7 337 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 PLAGL2Q9UPG8 496 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 RIPK3Q9Y572 518 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 MCM3APO60318 1980 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 IGSF10Q6WRI0 2623 aa5.38□□□□□ -1.55
HERC3-213ENST00000598772 ITPR1Q14643 2758 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 CXCL10P02778 98 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 SRGAP2BP0DMP2 458 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 IBSPP21815 317 aaPredicted RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 DNAJB1P25685 340 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 USP5P45974 858 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 CPT1AP50416 773 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 PLCD1P51178 756 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 NKX3-2P78367 333 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 LSM11P83369 360 aaKnown RBP eCLIP5.37□□□□□ -1.55
HERC3-213ENST00000598772 PURAQ00577 322 aaKnown RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 C19orf57Q0VDD7 668 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 RASGRF1Q13972 1273 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 BTG3Q14201 252 aaPredicted RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 BEND3Q5T5X7 828 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 GORABQ5T7V8 394 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 CCDC102BQ68D86 513 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 GDF6Q6KF10 455 aaPredicted RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 CES5AQ6NT32 575 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 NFRKBQ6P4R8 1299 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 ZNF467Q7Z7K2 595 aaPredicted RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 FAM133AQ8N9E0 248 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 TDRD5Q8NAT2 981 aaKnown RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 POF1BQ8WVV4 589 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 NSUN4Q96CB9 384 aaKnown RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 ZFP91Q96JP5 570 aaPredicted RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 GPR108Q9NPR9 543 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 SPATA6Q9NWH7 488 aaPredicted RBP5.37□□□□□ -1.55
HERC3-213ENST00000598772 SERPINB13Q9UIV8 391 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 FLT1P17948 1338 aa5.37□□□□□ -1.55
HERC3-213ENST00000598772 ASXL3Q9C0F0 2248 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 CACNA1IQ9P0X4 2223 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 DNAJC25-GNG10A0A024R161 153 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 EYA2O00167 538 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 LAMTOR5O43504 91 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 PARNO95453 639 aaKnown RBP5.36□□□□□ -1.55
HERC3-213ENST00000598772 MMP1P03956 469 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 PRB1P04280 392 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 GUCY1A2P33402 732 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 TIMM10P62072 90 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 TDGQ13569 410 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 CAMK1Q14012 370 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 SPOUT1Q5T280 376 aaKnown RBP5.36□□□□□ -1.55
HERC3-213ENST00000598772 ZNF618Q5T7W0 954 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 NAA16Q6N069 864 aaPredicted RBP5.36□□□□□ -1.55
HERC3-213ENST00000598772 TATDN1Q6P1N9 297 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 ATG9AQ7Z3C6 839 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 METTL16Q86W50 562 aaKnown RBP5.36□□□□□ -1.55
HERC3-213ENST00000598772 CLEC10AQ8IUN9 316 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 MAGEB6Q8N7X4 407 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 SPPL3Q8TCT6 385 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 TOP1MTQ969P6 601 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 ALG1Q9BT22 464 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 TEX13BQ9BXU2 312 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 WDR11Q9BZH6 1224 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 KATNBL1Q9H079 304 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 POMKQ9H5K3 350 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 TBC1D17Q9HA65 648 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 ARHGEF10LQ9HCE6 1279 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 RAVER2Q9HCJ3 691 aaKnown RBP5.36□□□□□ -1.55
HERC3-213ENST00000598772 IFT57Q9NWB7 429 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 DBR1Q9UK59 544 aaKnown RBP5.36□□□□□ -1.55
HERC3-213ENST00000598772 ZNF214Q9UL59 606 aaPredicted RBP5.36□□□□□ -1.55
HERC3-213ENST00000598772 COG6Q9Y2V7 657 aa5.36□□□□□ -1.55
HERC3-213ENST00000598772 SIT1Q9Y3P8 196 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms