RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 GOLGA8AA7E2F4 631 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 GOLGA8BA8MQT2 603 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 TLR3O15455 904 aaKnown RBP19.21■□□□□ 0.67
USHBP1-208ENST00000598309 GH1P01241 217 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 RPS6KB1P23443 525 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 ARHGAP1Q07960 439 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 FUT2Q10981 343 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 KCNV1Q6PIU1 500 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 Q6ZUG5 572 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 TEX2Q8IWB9 1127 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 IL31RAQ8NI17 732 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 EMID1Q96A84 441 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-208ENST00000598309 MTG1Q9BT17 334 aaPredicted RBP19.21■□□□□ 0.67
USHBP1-208ENST00000598309 AGXT2Q9BYV1 514 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 PCDH10Q9P2E7 1040 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
USHBP1-208ENST00000598309 MRVI1Q9Y6F6 885 aa19.21■□□□□ 0.67
USHBP1-208ENST00000598309 NID2Q14112 1375 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 STAM2O75886 525 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 MYCLP12524 364 aaPredicted RBP19.2■□□□□ 0.66
USHBP1-208ENST00000598309 CPA1P15085 419 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 RAG1P15918 1043 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 CCDC82Q8N4S0 544 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 SMARCC2Q8TAQ2 1214 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 BADQ92934 168 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 USP26Q9BXU7 913 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 GRIN2DO15399 1336 aa19.2■□□□□ 0.66
USHBP1-208ENST00000598309 KIAA1217Q5T5P2 1943 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 CCDC196A0A1B0GTZ2 297 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 hCG_1984214I3L0E3 225 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 MEIS2O14770 477 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 RGS20O76081 388 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 CD4P01730 458 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 MYL3P08590 195 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 CASTP20810 708 aaKnown RBP19.19■□□□□ 0.66
USHBP1-208ENST00000598309 ITGB8P26012 769 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 LY6KQ17RY6 165 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 LRIT3Q3SXY7 679 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 PPP1R18Q6NYC8 613 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 ZNF713Q8N859 430 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-208ENST00000598309 BRF1Q92994 677 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 PSTPIP2Q9H939 334 aa19.19■□□□□ 0.66
USHBP1-208ENST00000598309 FAM217BQ9NTX9 383 aaPredicted RBP19.19■□□□□ 0.66
USHBP1-208ENST00000598309 MMP3P08254 477 aa19.18■□□□□ 0.66
USHBP1-208ENST00000598309 TGFB3P10600 412 aa19.18■□□□□ 0.66
USHBP1-208ENST00000598309 METAP2P50579 478 aaKnown RBP eCLIP19.18■□□□□ 0.66
USHBP1-208ENST00000598309 PSMC6P62333 389 aa19.18■□□□□ 0.66
USHBP1-208ENST00000598309 GNPTABQ3T906 1256 aa19.18■□□□□ 0.66
USHBP1-208ENST00000598309 XRRA1Q6P2D8 792 aa19.18■□□□□ 0.66
USHBP1-208ENST00000598309 USP17L6PQ6QN14 398 aa19.18■□□□□ 0.66
USHBP1-208ENST00000598309 HEATR3Q7Z4Q2 680 aa19.18■□□□□ 0.66
USHBP1-208ENST00000598309 AFG1LQ8WV93 481 aa19.18■□□□□ 0.66
USHBP1-208ENST00000598309 hCG_1642624A0A1W2PR95 340 aa19.17■□□□□ 0.66
USHBP1-208ENST00000598309 TIMP1P01033 207 aa19.17■□□□□ 0.66
USHBP1-208ENST00000598309 APOBRQ0VD83 1088 aa19.17■□□□□ 0.66
USHBP1-208ENST00000598309 LAMC2Q13753 1193 aa19.17■□□□□ 0.66
USHBP1-208ENST00000598309 TM6SF1Q9BZW5 370 aa19.17■□□□□ 0.66
USHBP1-208ENST00000598309 ZSWIM6Q9HCJ5 1215 aa19.17■□□□□ 0.66
USHBP1-208ENST00000598309 NAP1L2Q9ULW6 460 aaPredicted RBP19.17■□□□□ 0.66
USHBP1-208ENST00000598309 SCN10AQ9Y5Y9 1956 aa19.17■□□□□ 0.66
USHBP1-208ENST00000598309 CDC27P30260 824 aa19.16■□□□□ 0.66
USHBP1-208ENST00000598309 ICAM3P32942 547 aa19.16■□□□□ 0.66
USHBP1-208ENST00000598309 EVCP57679 992 aa19.16■□□□□ 0.66
USHBP1-208ENST00000598309 MRPS9P82933 396 aaKnown RBP19.16■□□□□ 0.66
USHBP1-208ENST00000598309 PCNX4Q63HM2 1172 aa19.16■□□□□ 0.66
USHBP1-208ENST00000598309 WWC2Q6AWC2 1192 aa19.16■□□□□ 0.66
USHBP1-208ENST00000598309 NFRKBQ6P4R8 1299 aa19.16■□□□□ 0.66
USHBP1-208ENST00000598309 RUFY3Q7L099 469 aa19.16■□□□□ 0.66
USHBP1-208ENST00000598309 PPTC7Q8NI37 304 aa19.16■□□□□ 0.66
USHBP1-208ENST00000598309 GPKOWQ92917 476 aaPredicted RBP eCLIP19.16■□□□□ 0.66
USHBP1-208ENST00000598309 INPP4AQ96PE3 977 aaPredicted RBP19.16■□□□□ 0.66
USHBP1-208ENST00000598309 ALDH8A1Q9H2A2 487 aaPredicted RBP19.16■□□□□ 0.66
USHBP1-208ENST00000598309 SOX1O00570 391 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-208ENST00000598309 B4GALT4O60513 344 aa19.15■□□□□ 0.66
USHBP1-208ENST00000598309 EIF5BO60841 1220 aaKnown RBP19.15■□□□□ 0.66
USHBP1-208ENST00000598309 HOXD8P13378 290 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-208ENST00000598309 UBA1P22314 1058 aaKnown RBP19.15■□□□□ 0.66
USHBP1-208ENST00000598309 FPGSQ05932 587 aa19.15■□□□□ 0.66
USHBP1-208ENST00000598309 PTPN11Q06124 597 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-208ENST00000598309 DGKDQ16760 1214 aa19.15■□□□□ 0.66
USHBP1-208ENST00000598309 CELF3Q5SZQ8 465 aaKnown RBP19.15■□□□□ 0.66
USHBP1-208ENST00000598309 MFSD5Q6N075 450 aa19.15■□□□□ 0.66
USHBP1-208ENST00000598309 DHX37Q8IY37 1157 aaKnown RBP19.15■□□□□ 0.66
USHBP1-208ENST00000598309 CYP46A1Q9Y6A2 500 aa19.15■□□□□ 0.66
USHBP1-208ENST00000598309 V9GY48 417 aaPredicted RBP19.15■□□□□ 0.66
USHBP1-208ENST00000598309 FIBPO43427 364 aa19.14■□□□□ 0.65
USHBP1-208ENST00000598309 SUPT20HL2P0C7V6 817 aa19.14■□□□□ 0.65
USHBP1-208ENST00000598309 NAPAP54920 295 aa19.14■□□□□ 0.65
USHBP1-208ENST00000598309 NBPF20Q3BBV1 942 aa19.14■□□□□ 0.65
USHBP1-208ENST00000598309 MYSM1Q5VVJ2 828 aa19.14■□□□□ 0.65
USHBP1-208ENST00000598309 GPR153Q6NV75 609 aa19.14■□□□□ 0.65
USHBP1-208ENST00000598309 GLT8D2Q9H1C3 349 aa19.14■□□□□ 0.65
USHBP1-208ENST00000598309 BARHL2Q9NY43 387 aa19.14■□□□□ 0.65
USHBP1-208ENST00000598309 SPDYE3A6NKU9 549 aa19.13■□□□□ 0.65
USHBP1-208ENST00000598309 SPATA31C2B4DYI2 1134 aa19.13■□□□□ 0.65
USHBP1-208ENST00000598309 STXBP3O00186 592 aa19.13■□□□□ 0.65
USHBP1-208ENST00000598309 GGPS1O95749 300 aa19.13■□□□□ 0.65
USHBP1-208ENST00000598309 ADD1P35611 737 aaKnown RBP19.13■□□□□ 0.65
USHBP1-208ENST00000598309 UBE2SQ16763 222 aa19.13■□□□□ 0.65
USHBP1-208ENST00000598309 PFKFB3Q16875 520 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms