RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 KANSL2Q9H9L4 492 aa14.24□□□□□ -0.13
ZNF558-202ENST00000593891 MCM9Q9NXL9 1143 aa14.24□□□□□ -0.13
ZNF558-202ENST00000593891 DDX49Q9Y6V7 483 aaKnown RBP14.24□□□□□ -0.13
ZNF558-202ENST00000593891 ASH1LQ9NR48 2969 aaKnown RBP14.24□□□□□ -0.13
ZNF558-202ENST00000593891 MCM3APO60318 1980 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 KINO60870 393 aaKnown RBP14.23□□□□□ -0.13
ZNF558-202ENST00000593891 SRGAP2BP0DMP2 458 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 NPR3P17342 541 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 PTK7Q13308 1070 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 MBTPS1Q14703 1052 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 CRIPAKQ8N1N5 446 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 SEPT8Q92599 483 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 CLP1Q92989 425 aaKnown RBP14.23□□□□□ -0.13
ZNF558-202ENST00000593891 KIFC2Q96AC6 838 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 CCDC17Q96LX7 622 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 SLC38A10Q9HBR0 1119 aa14.23□□□□□ -0.13
ZNF558-202ENST00000593891 A1CFQ9NQ94 594 aaKnown RBP14.23□□□□□ -0.13
ZNF558-202ENST00000593891 STK25O00506 426 aa14.22□□□□□ -0.13
ZNF558-202ENST00000593891 NKRFO15226 690 aaKnown RBP eCLIP14.22□□□□□ -0.13
ZNF558-202ENST00000593891 NAALADL2Q58DX5 795 aa14.22□□□□□ -0.13
ZNF558-202ENST00000593891 PLEKHG4Q58EX7 1191 aa14.22□□□□□ -0.13
ZNF558-202ENST00000593891 TRAF7Q6Q0C0 670 aa14.22□□□□□ -0.13
ZNF558-202ENST00000593891 LRSAM1Q6UWE0 723 aa14.22□□□□□ -0.13
ZNF558-202ENST00000593891 P2RX5Q93086 422 aa14.22□□□□□ -0.13
ZNF558-202ENST00000593891 BORCS6Q96GS4 357 aa14.22□□□□□ -0.13
ZNF558-202ENST00000593891 NUP88Q99567 741 aaPredicted RBP14.22□□□□□ -0.13
ZNF558-202ENST00000593891 FOCADQ5VW36 1801 aa14.22□□□□□ -0.13
ZNF558-202ENST00000593891 RSPH10B2B2RC85 870 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 CYP2E1P05181 493 aaPredicted RBP14.21□□□□□ -0.13
ZNF558-202ENST00000593891 LINC00271P0C7V0 271 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 RSPH10BP0C881 870 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 SP9P0CG40 484 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 C7orf31Q8N865 590 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 ATP8B4Q8TF62 1192 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 S1PR5Q9H228 398 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 GPR108Q9NPR9 543 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
ZNF558-202ENST00000593891 ZMIZ1Q9ULJ6 1067 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 USP18Q9UMW8 372 aa14.21□□□□□ -0.13
ZNF558-202ENST00000593891 C2CD4DB7Z1M9 353 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 ASGR2P07307 311 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 UBTFL1P0CB47 393 aaPredicted RBP14.2□□□□□ -0.14
ZNF558-202ENST00000593891 DNAJB1P25685 340 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 TTC39AQ5SRH9 613 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 SPPL3Q8TCT6 385 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 MICAL1Q8TDZ2 1067 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 MORC4Q8TE76 937 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 GTF2IRD1Q9UHL9 959 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 FBXL21Q9UKT6 434 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 SCN10AQ9Y5Y9 1956 aa14.2□□□□□ -0.14
ZNF558-202ENST00000593891 ADGRA3Q8IWK6 1321 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.19□□□□□ -0.14
ZNF558-202ENST00000593891 RBM47A0AV96 593 aaKnown RBP14.19□□□□□ -0.14
ZNF558-202ENST00000593891 ARP10275 920 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 RFX1P22670 979 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 SHC2P98077 582 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 EVX2Q03828 476 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 BTG3Q14201 252 aaPredicted RBP14.19□□□□□ -0.14
ZNF558-202ENST00000593891 PPP2R5BQ15173 497 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 TRIM71Q2Q1W2 868 aaKnown RBP14.19□□□□□ -0.14
ZNF558-202ENST00000593891 CDCA3Q99618 268 aaPredicted RBP14.19□□□□□ -0.14
ZNF558-202ENST00000593891 RNF146Q9NTX7 359 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 HDAC5Q9UQL6 1122 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 PARP14Q460N5 1801 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 MYH1P12882 1939 aa14.19□□□□□ -0.14
ZNF558-202ENST00000593891 TRIP12Q14669 1992 aaPredicted RBP14.18□□□□□ -0.14
ZNF558-202ENST00000593891 PER2O15055 1255 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 IDH1O75874 414 aaKnown RBP14.18□□□□□ -0.14
ZNF558-202ENST00000593891 ITGB1P05556 798 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 KCNA4P22459 653 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 PDE4BQ07343 736 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 TKFCQ3LXA3 575 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 CCDC158Q5M9N0 1113 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 SIX5Q8N196 739 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 LRRC47Q8N1G4 583 aaKnown RBP14.18□□□□□ -0.14
ZNF558-202ENST00000593891 POF1BQ8WVV4 589 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 NECTIN4Q96NY8 510 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 APOL5Q9BWW9 433 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 ERVK-5Q9HDB9 667 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 PIH1D3Q9NQM4 214 aaKnown RBP14.18□□□□□ -0.14
ZNF558-202ENST00000593891 ADD3Q9UEY8 706 aaKnown RBP14.18□□□□□ -0.14
ZNF558-202ENST00000593891 LIMD1Q9UGP4 676 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 MICAL3Q7RTP6 2002 aa14.18□□□□□ -0.14
ZNF558-202ENST00000593891 ASPMQ8IZT6 3477 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 SLC30A4O14863 429 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 FDX1P10109 184 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 PMLP29590 882 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 THPOP40225 353 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 TECP42680 631 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 RBM10P98175 930 aaKnown RBP14.17□□□□□ -0.14
ZNF558-202ENST00000593891 TBC1D8BQ0IIM8 1120 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 ANKRD54Q6NXT1 300 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 ZDHHC14Q8IZN3 488 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 NETO1Q8TDF5 533 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 DYNLL2Q96FJ2 89 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 TRERF1Q96PN7 1200 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 CRNKL1Q9BZJ0 848 aaKnown RBP14.17□□□□□ -0.14
ZNF558-202ENST00000593891 HDAC6Q9UBN7 1215 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 FEM1BQ9UK73 627 aa14.17□□□□□ -0.14
ZNF558-202ENST00000593891 LHX6Q9UPM6 363 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms