RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 TEX2Q8IWB9 1127 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 PNMA5Q96PV4 448 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 DDX25Q9UHL0 483 aaKnown RBP20.98■□□□□ 0.95
HDAC5-212ENST00000593013 ITIH6Q6UXX5 1313 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 SLC26A4O43511 780 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 BMP3P12645 472 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 PPP1R2P41236 205 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 MAP3K9P80192 1104 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 PTPN14Q15678 1187 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 FILIP1LQ4L180 1135 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 TMEM119Q4V9L6 283 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 SYDE2Q5VT97 1194 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 CNNM4Q6P4Q7 775 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 MOB2Q70IA6 237 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 SCYL3Q8IZE3 742 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 TC2NQ8N9U0 490 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 CCDC47Q96A33 483 aaKnown RBP20.98■□□□□ 0.95
HDAC5-212ENST00000593013 PLIN2Q99541 437 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 AMNQ9BXJ7 453 aa20.98■□□□□ 0.95
HDAC5-212ENST00000593013 CYP3A7-CYP3A51PA0A087WV96 503 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 TUBB4AP04350 444 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 CYP3A7P24462 503 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 HOXA7P31268 230 aaPredicted RBP20.97■□□□□ 0.95
HDAC5-212ENST00000593013 IREB2P48200 963 aaKnown RBP20.97■□□□□ 0.95
HDAC5-212ENST00000593013 USP11P51784 963 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 STIM1Q13586 685 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 CRYGNQ8WXF5 182 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 HAS1Q92839 578 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 DHTKD1Q96HY7 919 aaPredicted RBP20.97■□□□□ 0.95
HDAC5-212ENST00000593013 PPP1R13BQ96KQ4 1090 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 BLOC1S4Q9NUP1 217 aa20.97■□□□□ 0.95
HDAC5-212ENST00000593013 ARHGAP6O43182 974 aa20.96■□□□□ 0.95
HDAC5-212ENST00000593013 TEX33O43247 280 aa20.96■□□□□ 0.95
HDAC5-212ENST00000593013 FSTL1Q12841 308 aa20.96■□□□□ 0.95
HDAC5-212ENST00000593013 VGLL4Q14135 290 aa20.96■□□□□ 0.95
HDAC5-212ENST00000593013 KRT31Q15323 416 aa20.96■□□□□ 0.95
HDAC5-212ENST00000593013 CEP135Q66GS9 1140 aa20.96■□□□□ 0.95
HDAC5-212ENST00000593013 ANO3Q9BYT9 981 aa20.96■□□□□ 0.95
HDAC5-212ENST00000593013 PHIPQ8WWQ0 1821 aa20.95■□□□□ 0.95
HDAC5-212ENST00000593013 A0A1W2PRG0 241 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 RIOK3O14730 519 aaKnown RBP20.95■□□□□ 0.94
HDAC5-212ENST00000593013 PSMA7O14818 248 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 HYIQ5T013 277 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 LDLRAD1Q5T700 205 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 CST9Q5W186 159 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 NOC3LQ8WTT2 800 aaKnown RBP20.95■□□□□ 0.94
HDAC5-212ENST00000593013 SNCAIPQ9Y6H5 919 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 PASKQ96RG2 1323 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 MEIS2O14770 477 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 STX10O60499 249 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 PTPRAP18433 802 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 PTPN21Q16825 1174 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 TCP11X2Q5H9J9 407 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 SV2BQ7L1I2 683 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 ARMC9Q7Z3E5 817 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 CCDC84Q86UT8 332 aaPredicted RBP20.95■□□□□ 0.94
HDAC5-212ENST00000593013 FBXO11Q86XK2 927 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 ANKRD20A12PQ8NF67 263 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 PANX2Q96RD6 677 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 THAP9Q9H5L6 903 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 ZNF408Q9H9D4 720 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 ARHGEF10LQ9HCE6 1279 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 KCNMB3Q9NPA1 279 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 EXOC1Q9NV70 894 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 TRMT1Q9NXH9 659 aaKnown RBP20.95■□□□□ 0.94
HDAC5-212ENST00000593013 TMX2Q9Y320 296 aa20.95■□□□□ 0.94
HDAC5-212ENST00000593013 KCNJ18B7U540 433 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L15C9J2P7 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L13C9JLJ4 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L11C9JVI0 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L18D6R9N7 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L22D6RA61 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L17D6RBQ6 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L19D6RCP7 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L20D6RJB6 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 RAD21O60216 631 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 CELF2O95319 508 aaKnown RBP20.94■□□□□ 0.94
HDAC5-212ENST00000593013 COPB1P53618 953 aaKnown RBP20.94■□□□□ 0.94
HDAC5-212ENST00000593013 FKBP1BP68106 108 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 ASIC1P78348 528 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L24Q0WX57 530 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 TTLL12Q14166 644 aaPredicted RBP20.94■□□□□ 0.94
HDAC5-212ENST00000593013 KCNJ12Q14500 433 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 KRT79Q5XKE5 535 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 USP17L6PQ6QN14 398 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 ANKRD13AQ8IZ07 590 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 ACER1Q8TDN7 264 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 LARP4BQ92615 738 aaKnown RBP20.94■□□□□ 0.94
HDAC5-212ENST00000593013 RAD54LQ92698 747 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 NUP88Q99567 741 aaPredicted RBP20.94■□□□□ 0.94
HDAC5-212ENST00000593013 BAG1Q99933 345 aaPredicted RBP20.94■□□□□ 0.94
HDAC5-212ENST00000593013 PICK1Q9NRD5 415 aa20.94■□□□□ 0.94
HDAC5-212ENST00000593013 PVALEFA0A1B0GWK0 134 aa20.93■□□□□ 0.94
HDAC5-212ENST00000593013 POTEMA6NI47 508 aa20.93■□□□□ 0.94
HDAC5-212ENST00000593013 EEF1GP26641 437 aaKnown RBP20.93■□□□□ 0.94
HDAC5-212ENST00000593013 TTI2Q6NXR4 508 aa20.93■□□□□ 0.94
HDAC5-212ENST00000593013 IRF2BP1Q8IU81 584 aa20.93■□□□□ 0.94
HDAC5-212ENST00000593013 SNX29Q8TEQ0 813 aa20.93■□□□□ 0.94
HDAC5-212ENST00000593013 LRRC27Q9C0I9 530 aa20.93■□□□□ 0.94
HDAC5-212ENST00000593013 GBA2Q9HCG7 927 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms