RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 TRAF7Q6Q0C0 670 aa11.96□□□□□ -0.49
SMCO4P1-201ENST00000592909 ADHFE1Q8IWW8 467 aa11.96□□□□□ -0.49
SMCO4P1-201ENST00000592909 BANK1Q8NDB2 785 aa11.96□□□□□ -0.49
SMCO4P1-201ENST00000592909 UPF3BQ9BZI7 483 aaKnown RBP11.96□□□□□ -0.49
SMCO4P1-201ENST00000592909 NAPBQ9H115 298 aa11.96□□□□□ -0.49
SMCO4P1-201ENST00000592909 ZNF318Q5VUA4 2279 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 H3BNC9 293 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 NCK2O43639 380 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 NMT2O60551 498 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 LGR5O75473 907 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 GH1P01241 217 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 PTK7Q13308 1070 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 MBTPS1Q14703 1052 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 TRIM71Q2Q1W2 868 aaKnown RBP11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 EPC2Q52LR7 807 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 TCEAL5Q5H9L2 206 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 HDAC6Q9UBN7 1215 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 DDX19BQ9UMR2 479 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 LCTP09848 1927 aa11.95□□□□□ -0.5
SMCO4P1-201ENST00000592909 SMARCA5O60264 1052 aaPredicted RBP11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 AMHP03971 560 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 IRS1P35568 1242 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 ARHGAP1Q07960 439 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 HERC4Q5GLZ8 1057 aaPredicted RBP11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 ZNF618Q5T7W0 954 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 C7orf31Q8N865 590 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 ANKS1AQ92625 1134 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 MAF1Q9H063 256 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 NSUN3Q9H649 340 aaKnown RBP11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 MTMR7Q9Y216 660 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 MYH7P12883 1935 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 PTPRSQ13332 1948 aa11.94□□□□□ -0.5
SMCO4P1-201ENST00000592909 EMSYQ7Z589 1322 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 WDR19Q8NEZ3 1342 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 HAS3O00219 553 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 PSEN2P49810 448 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 GPM6BQ13491 265 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 SMAD2Q15796 467 aaKnown RBP11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 DGKDQ16760 1214 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 LY6KQ17RY6 165 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 BMP8AQ7Z5Y6 402 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 MYOCDQ8IZQ8 938 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 DBF4BQ8NFT6 615 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 EMID1Q96A84 441 aaPredicted RBP11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 SEC62Q99442 399 aaKnown RBP11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 KATNAL1Q9BW62 490 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 CHMP4BQ9H444 224 aaKnown RBP11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 INCENPQ9NQS7 918 aa11.93□□□□□ -0.5
SMCO4P1-201ENST00000592909 TRIP12Q14669 1992 aaPredicted RBP11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 ORC4O43929 436 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 ST18O60284 1047 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 RANBP6O60518 1105 aaKnown RBP11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 F2P00734 622 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 FGRP09769 529 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 TOP1P11387 765 aaKnown RBP11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 LTBRP36941 435 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 MFSD10Q14728 455 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 CTC1Q2NKJ3 1217 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 WNT8BQ93098 351 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 TOP1MTQ969P6 601 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 GPATCH3Q96I76 525 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 PHOX2BQ99453 314 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 POP1Q99575 1024 aaKnown RBP11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 TMEM47Q9BQJ4 181 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 ALG1Q9BT22 464 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 GPCPD1Q9NPB8 672 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 CLDND1Q9NY35 253 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
SMCO4P1-201ENST00000592909 FRMPD2Q68DX3 1309 aaPredicted RBP11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 PTPN5P54829 565 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 CTDSPL2Q05D32 466 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 PKN1Q16512 942 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 KIAA0753Q2KHM9 967 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 PLEKHG4Q58EX7 1191 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 EP400NLQ6ZTU2 488 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 SEPT14Q6ZU15 432 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 CHST3Q7LGC8 479 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 RPAINQ86UA6 219 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 FBXO11Q86XK2 927 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 PRSS33Q8NF86 280 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 EDAQ92838 391 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 IWS1Q96ST2 819 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 PRRX2Q99811 253 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 TCP11L1Q9NUJ3 509 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 MUTYHQ9UIF7 546 aa11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 DDX41Q9UJV9 622 aaKnown RBP11.91□□□□□ -0.5
SMCO4P1-201ENST00000592909 SIP14410 1827 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 RSPH10B2B2RC85 870 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 FOXP2O15409 715 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 RSPH10BP0C881 870 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 PDHBP11177 359 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 HOXD8P13378 290 aaPredicted RBP11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 ZNF200P98182 395 aaPredicted RBP11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 ZNF543Q08ER8 600 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 LAMC2Q13753 1193 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 STXBP2Q15833 593 aa11.9□□□□□ -0.5
SMCO4P1-201ENST00000592909 ZMYM1Q5SVZ6 1142 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms