RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 SUGCTQ9HAC7 445 aa18.66■□□□□ 0.58
DDX39A-216ENST00000591275 COL20A1Q9P218 1284 aa18.66■□□□□ 0.58
DDX39A-216ENST00000591275 SALL3Q9BXA9 1300 aa18.66■□□□□ 0.58
DDX39A-216ENST00000591275 GJB5O95377 273 aa18.65■□□□□ 0.58
DDX39A-216ENST00000591275 CASTP20810 708 aaKnown RBP18.65■□□□□ 0.58
DDX39A-216ENST00000591275 C7orf31Q8N865 590 aa18.65■□□□□ 0.58
DDX39A-216ENST00000591275 TTC14Q96N46 770 aa18.65■□□□□ 0.58
DDX39A-216ENST00000591275 TGS1Q96RS0 853 aaKnown RBP18.65■□□□□ 0.58
DDX39A-216ENST00000591275 RAD9AQ99638 391 aa18.65■□□□□ 0.58
DDX39A-216ENST00000591275 ZKSCAN3Q9BRR0 538 aa18.65■□□□□ 0.58
DDX39A-216ENST00000591275 LMCD1Q9NZU5 365 aa18.65■□□□□ 0.58
DDX39A-216ENST00000591275 HDAC6Q9UBN7 1215 aa18.65■□□□□ 0.58
DDX39A-216ENST00000591275 GTF2IRD1Q9UHL9 959 aa18.65■□□□□ 0.58
DDX39A-216ENST00000591275 KIAA1217Q5T5P2 1943 aa18.64■□□□□ 0.58
DDX39A-216ENST00000591275 LINC01553A4QN01 128 aa18.64■□□□□ 0.57
DDX39A-216ENST00000591275 GPR37L1O60883 481 aa18.64■□□□□ 0.57
DDX39A-216ENST00000591275 CXCL10P02778 98 aa18.64■□□□□ 0.57
DDX39A-216ENST00000591275 HSPD1P10809 573 aaKnown RBP18.64■□□□□ 0.57
DDX39A-216ENST00000591275 CDC37Q16543 378 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-216ENST00000591275 MCMDC2Q4G0Z9 681 aa18.64■□□□□ 0.57
DDX39A-216ENST00000591275 MFSD6Q6ZSS7 791 aa18.64■□□□□ 0.57
DDX39A-216ENST00000591275 ZNF589Q86UQ0 364 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-216ENST00000591275 TBC1D10CQ8IV04 446 aa18.64■□□□□ 0.57
DDX39A-216ENST00000591275 RGS22Q8NE09 1264 aa18.64■□□□□ 0.57
DDX39A-216ENST00000591275 SYTL5Q8TDW5 730 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-216ENST00000591275 NSUN6Q8TEA1 469 aaKnown RBP18.64■□□□□ 0.57
DDX39A-216ENST00000591275 CRBNQ96SW2 442 aa18.64■□□□□ 0.57
DDX39A-216ENST00000591275 UBE2ZQ9H832 354 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-216ENST00000591275 ARIH1Q9Y4X5 557 aaPredicted RBP18.64■□□□□ 0.57
DDX39A-216ENST00000591275 SIP14410 1827 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 ABHD14A-ACY1A0A1B0GW23 586 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 ZNF286BP0CG31 522 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 PSEN2P49810 448 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 ERVK-21P61565 698 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 RBL2Q08999 1139 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 STXBP2Q15833 593 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 DGKDQ16760 1214 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 GPATCH4Q5T3I0 446 aaKnown RBP18.63■□□□□ 0.57
DDX39A-216ENST00000591275 WNT8BQ93098 351 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 RMDN3Q96TC7 470 aa18.63■□□□□ 0.57
DDX39A-216ENST00000591275 PARNO95453 639 aaKnown RBP18.62■□□□□ 0.57
DDX39A-216ENST00000591275 EIF2AK2P19525 551 aaKnown RBP18.62■□□□□ 0.57
DDX39A-216ENST00000591275 KCNA5P22460 613 aa18.62■□□□□ 0.57
DDX39A-216ENST00000591275 ZNF200P98182 395 aaPredicted RBP18.62■□□□□ 0.57
DDX39A-216ENST00000591275 IKBKEQ14164 716 aa18.62■□□□□ 0.57
DDX39A-216ENST00000591275 MBTPS1Q14703 1052 aa18.62■□□□□ 0.57
DDX39A-216ENST00000591275 MFSD10Q14728 455 aa18.62■□□□□ 0.57
DDX39A-216ENST00000591275 ZNF618Q5T7W0 954 aa18.62■□□□□ 0.57
DDX39A-216ENST00000591275 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
DDX39A-216ENST00000591275 ZBTB47Q9UFB7 747 aaPredicted RBP18.62■□□□□ 0.57
DDX39A-216ENST00000591275 ABCB11O95342 1321 aa18.62■□□□□ 0.57
DDX39A-216ENST00000591275 NEDD4P46934 1319 aa18.62■□□□□ 0.57
DDX39A-216ENST00000591275 MYH7BA7E2Y1 1941 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 PI4K2BG5E9Z4 385 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 SORBS3O60504 671 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 NMIQ13287 307 aaPredicted RBP18.61■□□□□ 0.57
DDX39A-216ENST00000591275 PTK7Q13308 1070 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 KIAA0753Q2KHM9 967 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 TRIM71Q2Q1W2 868 aaKnown RBP18.61■□□□□ 0.57
DDX39A-216ENST00000591275 ARHGEF16Q5VV41 709 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 TRAF7Q6Q0C0 670 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.61■□□□□ 0.571e-6■■■■□ 20.8
DDX39A-216ENST00000591275 ADGRF4Q8IZF3 695 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 C17orf80Q9BSJ5 609 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 DDX41Q9UJV9 622 aaKnown RBP18.61■□□□□ 0.57
DDX39A-216ENST00000591275 MYH6P13533 1939 aa18.61■□□□□ 0.57
DDX39A-216ENST00000591275 ZMYM6O95789 1325 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.6■□□□□ 0.57
DDX39A-216ENST00000591275 PDE1AP54750 535 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 LEXMQ3ZCV2 418 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 PNMA1Q8ND90 353 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 FBXO22Q8NEZ5 403 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 ESR2Q92731 530 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 IWS1Q96ST2 819 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 KATNAL1Q9BW62 490 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 MRVI1Q9Y6F6 885 aa18.6■□□□□ 0.57
DDX39A-216ENST00000591275 CCDC171Q6TFL3 1326 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 DHX16O60231 1041 aaKnown RBP18.59■□□□□ 0.57
DDX39A-216ENST00000591275 EFCAB14O75071 495 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 F2P00734 622 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 IL9P15248 144 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 SSTR3P32745 418 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-216ENST00000591275 HIC1Q14526 733 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 QRICH1Q2TAL8 776 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 MCF2L2Q86YR7 1114 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 FAM178BQ8IXR5 827 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
DDX39A-216ENST00000591275 GJD3Q8N144 294 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.59■□□□□ 0.57
DDX39A-216ENST00000591275 VAT1LQ9HCJ6 419 aa18.59■□□□□ 0.57
DDX39A-216ENST00000591275 HAS3O00219 553 aa18.58■□□□□ 0.56
DDX39A-216ENST00000591275 LGR5O75473 907 aa18.58■□□□□ 0.56
DDX39A-216ENST00000591275 EIF3JO75822 258 aaKnown RBP18.58■□□□□ 0.56
DDX39A-216ENST00000591275 NR3C2P08235 984 aa18.58■□□□□ 0.56
DDX39A-216ENST00000591275 PCP11498 1178 aaKnown RBP18.58■□□□□ 0.56
DDX39A-216ENST00000591275 LAMC2Q13753 1193 aa18.58■□□□□ 0.56
DDX39A-216ENST00000591275 PTCRAQ6ISU1 281 aaPredicted RBP18.58■□□□□ 0.56
DDX39A-216ENST00000591275 FBXO11Q86XK2 927 aa18.58■□□□□ 0.56
DDX39A-216ENST00000591275 DGKHQ86XP1 1220 aa18.58■□□□□ 0.56
DDX39A-216ENST00000591275 MYOCDQ8IZQ8 938 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms