RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 IFRD2Q12894 506 aaPredicted RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 NLRP4Q96MN2 994 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 MTG1Q9BT17 334 aaPredicted RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 PARNO95453 639 aaKnown RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 PSMD2Q13200 908 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 PREPLQ4J6C6 727 aaPredicted RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 ZMYM1Q5SVZ6 1142 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 PRPF31Q8WWY3 499 aaKnown RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 TMEM206Q9H813 350 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 LSM7Q9UK45 103 aaKnown RBP12.59□□□□□ -0.39
SEH1L-208ENST00000590843 SYNGAP1Q96PV0 1343 aa12.59□□□□□ -0.39
SEH1L-208ENST00000590843 MROH1Q8NDA8 1641 aa12.58□□□□□ -0.39
SEH1L-208ENST00000590843 NAA15Q9BXJ9 866 aaKnown RBP12.58□□□□□ -0.39
SEH1L-208ENST00000590843 IPPQ9Y573 584 aa12.58□□□□□ -0.39
SEH1L-208ENST00000590843 PNMA6EA0A0J9YXQ4 647 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 E7EWF7 191 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 GPR182O15218 404 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 MAFGO15525 162 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 HOXA10P31260 410 aaPredicted RBP12.58□□□□□ -0.4
SEH1L-208ENST00000590843 SLC16A2P36021 539 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 ARL1P40616 181 aaPredicted RBP12.58□□□□□ -0.4
SEH1L-208ENST00000590843 STX1AQ16623 288 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 MYOCDQ8IZQ8 938 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 SKA1Q96BD8 255 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
SEH1L-208ENST00000590843 STRIP2Q9ULQ0 834 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 UNCXA6NJT0 531 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 GRK4P32298 578 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 TRAPPC10P48553 1259 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 BACE1P56817 501 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 PTPN12Q05209 780 aaKnown RBP12.58□□□□□ -0.4
SEH1L-208ENST00000590843 PTGDRQ13258 359 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 TMEM132BQ14DG7 1078 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 ZDHHC15Q96MV8 337 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 MAGEF1Q9HAY2 307 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 XPNPEP3Q9NQH7 507 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 CPB1P15086 417 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 ATXN3P54252 364 aaPredicted RBP12.58□□□□□ -0.4
SEH1L-208ENST00000590843 PPIGQ13427 754 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEH1L-208ENST00000590843 PRAMEF18Q5VWM3 479 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 CEP57Q86XR8 500 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 LCORLQ8N3X6 602 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 POMGNT1Q8WZA1 660 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 SLC28A3Q9HAS3 691 aa12.58□□□□□ -0.4
SEH1L-208ENST00000590843 CYLC1P35663 651 aaPredicted RBP12.57□□□□□ -0.4
SEH1L-208ENST00000590843 PPP2R3AQ06190 1150 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 MUM1L1Q5H9M0 696 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 TRIML1Q8N9V2 468 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 SLC38A7Q9NVC3 462 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 TXNDC16Q9P2K2 825 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 ADM5C9JUS6 153 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 ASAP2O43150 1006 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 TADA2AO75478 443 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 TBC1D8O95759 1140 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 SEPT1Q8WYJ6 367 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 ACCSQ96QU6 501 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 MTA3Q9BTC8 594 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 HMGCRP04035 888 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 KRT9P35527 623 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 MCAMP43121 646 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 LRRC4Q9HBW1 653 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 FAM169AQ9Y6X4 670 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 SNX17Q15036 470 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 DCUN1D2Q6PH85 259 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 USP26Q9BXU7 913 aa12.57□□□□□ -0.4
SEH1L-208ENST00000590843 RNF26Q9BY78 433 aaPredicted RBP12.57□□□□□ -0.4
SEH1L-208ENST00000590843 UBE2OQ9C0C9 1292 aaKnown RBP12.57□□□□□ -0.4
SEH1L-208ENST00000590843 ZSCAN12O43309 604 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 BPIFB4P59827 614 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 TTC1Q99614 292 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 DYRK4Q9NR20 520 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 LACTBP83111 547 aaPredicted RBP12.56□□□□□ -0.4
SEH1L-208ENST00000590843 FAM117BQ6P1L5 589 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 ZNF560Q96MR9 790 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 EMILIN2Q9BXX0 1053 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 SLC15A5A6NIM6 579 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 H7C4K7 107 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 K7ERI5 159 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 PQBP1O60828 265 aaKnown RBP12.56□□□□□ -0.4
SEH1L-208ENST00000590843 LRG1P02750 347 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 CYP4A11Q02928 519 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 SPDYE2Q495Y8 402 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 RYBPQ8N488 228 aaPredicted RBP12.56□□□□□ -0.4
SEH1L-208ENST00000590843 STAMQ92783 540 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 DYNLL2Q96FJ2 89 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 FAM204AQ9H8W3 233 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 HUS1O60921 280 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 FGAP02671 866 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 ZNF18P17022 549 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 CYP4A22Q5TCH4 519 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 LUZP1Q86V48 1076 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 TCEANC2Q96MN5 208 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 PIGSQ96S52 555 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 PLEKHF1Q96S99 279 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 CACYBPQ9HB71 228 aaKnown RBP12.56□□□□□ -0.4
SEH1L-208ENST00000590843 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
SEH1L-208ENST00000590843 CCDC175P0C221 793 aa12.55□□□□□ -0.4
SEH1L-208ENST00000590843 CAP2P40123 477 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms